Gene RPB_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3289 
Symbol 
ID3911090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3761078 
End bp3761746 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID637885191 
ProductABC transporter related 
Protein accessionYP_486896 
Protein GI86750400 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.830794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTCCG ACGTGCGTTT GGCTCGCGAC GGGCGCGAGG TTCTTCGCCG AGTCGATTTT 
CGCATCGACG AGGCCCGGAT CGGCATCCTC GGGCAAAACG GATCCGGCAA GTCGACATTG
CTGCGGATGA TGATCGGACT GATCGCTCCG TCGCAGGGGC GGGTAACGGT CGGTGGCCTC
GATCCGCATC ACGACTGCGT CGCGGTGCGC GACCGCATGG GCTTTCTGTT CCAGACGCCC
GACAACCAGA TCGTGTATCC GATCGTCCAC GAAGATCTCG CCTTCGGCCT GAAGGCGAGG
GGCCTGTCGC GTCAGATGGT GTCCGCGCGG ATCGCGGCTA GTCTGGACCG GCTCGGCATC
GGCGATCTGG CGGCGCGAAG GGTTCATGAA TTGTCGGGCG GCGAGCGGCA ACTCGTCGCC
TTGGCCGGCG TGCTGACGCG CGAACCGCCG ACTATCCTGT TCGACGAGCC GACGTCGCAG
CTCGATCTCG CCAACCGCAA TCGGTTTCGC AGGCTGCTGG CCGGGATGTC AGAACAGGCG
ATCGTCGCGA CCCACGATCT TGAATTGGTC GAGGATTTCG ACCGCGTGCT GGTGATCGAG
TCCGGGCGCG TCGTCGTCGA TGCGGCGCCG GCGGAGGCCA TCGCGCGCTA CCGGGAGCTG
TGCCGATGA
 
Protein sequence
MFSDVRLARD GREVLRRVDF RIDEARIGIL GQNGSGKSTL LRMMIGLIAP SQGRVTVGGL 
DPHHDCVAVR DRMGFLFQTP DNQIVYPIVH EDLAFGLKAR GLSRQMVSAR IAASLDRLGI
GDLAARRVHE LSGGERQLVA LAGVLTREPP TILFDEPTSQ LDLANRNRFR RLLAGMSEQA
IVATHDLELV EDFDRVLVIE SGRVVVDAAP AEAIARYREL CR