Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3289 |
Symbol | |
ID | 3911090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3761078 |
End bp | 3761746 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637885191 |
Product | ABC transporter related |
Protein accession | YP_486896 |
Protein GI | 86750400 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.830794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCTCCG ACGTGCGTTT GGCTCGCGAC GGGCGCGAGG TTCTTCGCCG AGTCGATTTT CGCATCGACG AGGCCCGGAT CGGCATCCTC GGGCAAAACG GATCCGGCAA GTCGACATTG CTGCGGATGA TGATCGGACT GATCGCTCCG TCGCAGGGGC GGGTAACGGT CGGTGGCCTC GATCCGCATC ACGACTGCGT CGCGGTGCGC GACCGCATGG GCTTTCTGTT CCAGACGCCC GACAACCAGA TCGTGTATCC GATCGTCCAC GAAGATCTCG CCTTCGGCCT GAAGGCGAGG GGCCTGTCGC GTCAGATGGT GTCCGCGCGG ATCGCGGCTA GTCTGGACCG GCTCGGCATC GGCGATCTGG CGGCGCGAAG GGTTCATGAA TTGTCGGGCG GCGAGCGGCA ACTCGTCGCC TTGGCCGGCG TGCTGACGCG CGAACCGCCG ACTATCCTGT TCGACGAGCC GACGTCGCAG CTCGATCTCG CCAACCGCAA TCGGTTTCGC AGGCTGCTGG CCGGGATGTC AGAACAGGCG ATCGTCGCGA CCCACGATCT TGAATTGGTC GAGGATTTCG ACCGCGTGCT GGTGATCGAG TCCGGGCGCG TCGTCGTCGA TGCGGCGCCG GCGGAGGCCA TCGCGCGCTA CCGGGAGCTG TGCCGATGA
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Protein sequence | MFSDVRLARD GREVLRRVDF RIDEARIGIL GQNGSGKSTL LRMMIGLIAP SQGRVTVGGL DPHHDCVAVR DRMGFLFQTP DNQIVYPIVH EDLAFGLKAR GLSRQMVSAR IAASLDRLGI GDLAARRVHE LSGGERQLVA LAGVLTREPP TILFDEPTSQ LDLANRNRFR RLLAGMSEQA IVATHDLELV EDFDRVLVIE SGRVVVDAAP AEAIARYREL CR
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