| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3262 |
|---|
| Symbol | |
|---|
| ID | 3911063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3732268 |
|---|
| End bp | 3733134 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637885164 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_486869 |
|---|
| Protein GI | 86750373 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.283096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA AGGCCGTGAT CACCTGCTCG CTGAACGGCG TGCTGACCGA CCCGAAGCAG
CACCACGTTC CGGTGACGCC GGAGCAGATG GCCCGCGAAG CCAGGGCGGC TTACGACGCC
GGCGCCGCGA TCGTGCACAT CCATCTGCGC GACCAGCGGC CCGACAAGGG CCACCTGCCG
AGTTGGGACG TGGCCGTCTC GCGCGAAATC CAGCAGGCGA TCCGCGAAGC CTGTCCGGGC
GTCATCATCA ACCACACCTC CGGCACCTCC GGGCCGCACT ATGAAGGGCC GCTCGCCTGC
ATCCGTGAGA CCAGGCCCGA GATCGCCGCC TGCAACGCCG GCTCGCTGAA CTATCTCAAG
GTCAAGTCCG ACAACAACTG GGCGTGGCCG CCGATGATGT TCGACAATTC GGTCGAGAAG
ATTCAGGACT TTCTCGCCGC GATGAGGGAC GCCGGCACGA TCCCCGAATT CGAATGTTTC
GACGTCGGCA TCGTGCGCTG CGTCGGCATG TATGTTCAGA CCGGGATGTA TGACGGCCCG
CTCGAGTACA ATTTCGTGAT GGGCGTCGCC TCCGGCATGC CGGCCGATCC CGAATTGCTG
CCGATCCTGC TGAAGCTGAA GCGCCCCGAG GCGCATTGGC AGGTGACCGC GATCGGCCGC
TCGGAGATCT GGCCGCTGCA CCAGGCGTGC GCCGACCTCG GCGGACATCT ACGCACCGGG
CTCGAAGACA CGTTCTATCT CGCCAATGGC GAGAAGGTGA CGTCGAACGG GCAATTGATC
GAGGAAATCG CCGGCTGCGC GCGGCGGGCA GGGCGCGAGA TCGCGAGCCC GGCGGAGGCG
CGCAAGATTT TCGGCGTGCT CAATTAG
|
|---|
| Protein sequence | MSDKAVITCS LNGVLTDPKQ HHVPVTPEQM AREARAAYDA GAAIVHIHLR DQRPDKGHLP
SWDVAVSREI QQAIREACPG VIINHTSGTS GPHYEGPLAC IRETRPEIAA CNAGSLNYLK
VKSDNNWAWP PMMFDNSVEK IQDFLAAMRD AGTIPEFECF DVGIVRCVGM YVQTGMYDGP
LEYNFVMGVA SGMPADPELL PILLKLKRPE AHWQVTAIGR SEIWPLHQAC ADLGGHLRTG
LEDTFYLANG EKVTSNGQLI EEIAGCARRA GREIASPAEA RKIFGVLN
|
|---|
| |