Gene RPB_3258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3258 
Symbol 
ID3911059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3725769 
End bp3726548 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID637885160 
Productenoyl-CoA hydratase 
Protein accessionYP_486865 
Protein GI86750369 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.686991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATG ACGCCGTGAT CATCGAACAG CGCGATCAGG CGCTGTGGAT CACCATCAAC 
CGTCCCGACA AGCGCAACGC CATCAATGCC GGTGTGGTCG AAGGCATCAG GACCGGCTGG
AAGCAGGCGC ATGACGATCC GTCGGTGCGC GTGATTGTAC TGACCGGCGC CGGTGACAAG
GCGTTCTGCG CCGGCGCCGA CCTGCAATCC ACCGGGGCCG CGTTCTCGTT CGACTTCTCC
AAGCCGAATG TCGACTACGC CGATCTGCTG CGGCTGGCGC AGAACGCCAC CAAGCCGTCG
ATCGCCCGCG TCAACGGCAC CTGCATGGCC GGCGGCATGG GCCTGCTGTG CATGACCGAC
ATGGCGGTGG CGGCGGATCA CGTCCTGTTC GGGCTGCCGG AGGTCAAGGT CGGCGTGTTC
CCGATGCAGG TGATGAGCCT GTTGCAGGAC ATCGCGCCGC GCCGGCTGAT CAATGAATGG
GCGCTGACCG GCGAGCCGTT CGATGCGCCG ACCGCGTGCG ACGCGGGCCT GCTGAACTAC
GTGGTGCCGG GCGGCGAGCT CGACGCCAAG GTCGACTGGC TGGTCAAGCG GCTGACCGAC
AAATCACCGA CCGCGATCCG CCGCGGCAAA TACGCGATGC GGGCGATCGC GTCGATGTCG
TTCGACGAGA GCATCGCCTA CACCGAAAGC CAGATTGCGC TCTTGGCGAT GACCGAAGAC
GCCAAAGAGG GCCTGAAGGC CTTCGCGGAG AAGCGCAAGC CGGTTTGGCC GGGGAAGTGA
 
Protein sequence
MSNDAVIIEQ RDQALWITIN RPDKRNAINA GVVEGIRTGW KQAHDDPSVR VIVLTGAGDK 
AFCAGADLQS TGAAFSFDFS KPNVDYADLL RLAQNATKPS IARVNGTCMA GGMGLLCMTD
MAVAADHVLF GLPEVKVGVF PMQVMSLLQD IAPRRLINEW ALTGEPFDAP TACDAGLLNY
VVPGGELDAK VDWLVKRLTD KSPTAIRRGK YAMRAIASMS FDESIAYTES QIALLAMTED
AKEGLKAFAE KRKPVWPGK