Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3256 |
Symbol | |
ID | 3911057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3722952 |
End bp | 3724214 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637885158 |
Product | beta-lactamase |
Protein accession | YP_486863 |
Protein GI | 86750367 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.748817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCCC ACCCCCAAAA GTCACGCGCT CCCGCGACCG GTTCTGCTGC CGATGCGGGC ATGTCCGAAC CCGCGCTGAA CCGGATCGAC GATCATCTGA AGCGGGTCTA TATCGACCCC GGCAAGTTCG CCGGCACCCA GACGCTGGTC TATCGCCGCG GCCGGATCGT CCACCAATCG TCACTTGGCC ACGCCGACCG CGAACGCCAG GTGCCGATCA AGGACGACAC AATCTTCCGC ATCTATTCGA TGACCAAGCC GATCACCTCG GTGGCGCTGA TGATGCTGTT CGAGGAAGGG CGGATCGCAC TCGACGATGC GGTGGCGAAG TACATTCCGG AATGGGCCGA TCTCGGCGTG TTTCAGGCCG GCATCGGGCC GCTGTTTCTG ACGAAGCCGC CGGCGCGCCC GATGCAGATC GTCGATCTGC TGCGGCACAC CTCCGGCCTG ACTTACGGCT TCCAGAATCG CACCAATGTC GACGCCGCGT ATCGCGACAA GGGCATCGGC GCGTTCGAGA AAGCCGGCAC GCTGGACTCG TGGATAGCGG ATCTCGCCCG CATTCCGCTG GAGTTCTCCC CCGGTGAGGC CTGGAACTAC TCGGTCTCGA CCGACGTGGT CGGCTATATC GTGCAGAAGA TCAGCGGCAT GCCGTTCGAA CAGTTCGTCA AGCAGCGCAT TCTCGATCCG CTCGGCATGA CCGACACCGA TTTCCACGTC CCTCCGGAGA AGGCGCACCG CCTCGCCGCC TGCTATTCCA CCGACGGCAA GGGCGGCATG ACGCTGCAGG ACGATCCGGC GACCAGCAGT TTCCTCGCAC CGCCCGACCT GATCTCGGGC GGCGGCGGGC TGCTCTCGAC CTCTGCCGAC TATCTGAGAT TCTGCCGGGC GCTCTTGAAC GGCGGCGAAC TCGACGGCGT CCGCCTGATC GGGCCGAAAA CGCTGGCGCT GATGACCACC AACCACCTGC CCGGCAATCG CGACCTCACC GAAATGTCGC GCTCGATGTT CAGCGAGGCG ACCAACGCCG GTATCGGCTT CGGTCTCGGC TTCGCGGTGA ACATGAACCC GGCCCTGACG CTGCTGCCCG GCAGCGCCGG CGAGTATTAT TGGGGCGGCG CCGCCTCAAC CGCGTTCTGG ATCGACCCGG CGGAGGAGCT GATCGCCATC TTCATGACGC AGTTGCTGCC GTCGAGCAGC TATCCGATCC GCCGCGAACT GCGGGCGCTG GTCTACGGCG CGATCACCGA AAGCAATCTC TGA
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Protein sequence | MPAHPQKSRA PATGSAADAG MSEPALNRID DHLKRVYIDP GKFAGTQTLV YRRGRIVHQS SLGHADRERQ VPIKDDTIFR IYSMTKPITS VALMMLFEEG RIALDDAVAK YIPEWADLGV FQAGIGPLFL TKPPARPMQI VDLLRHTSGL TYGFQNRTNV DAAYRDKGIG AFEKAGTLDS WIADLARIPL EFSPGEAWNY SVSTDVVGYI VQKISGMPFE QFVKQRILDP LGMTDTDFHV PPEKAHRLAA CYSTDGKGGM TLQDDPATSS FLAPPDLISG GGGLLSTSAD YLRFCRALLN GGELDGVRLI GPKTLALMTT NHLPGNRDLT EMSRSMFSEA TNAGIGFGLG FAVNMNPALT LLPGSAGEYY WGGAASTAFW IDPAEELIAI FMTQLLPSSS YPIRRELRAL VYGAITESNL
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