| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3255 |
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| Symbol | |
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| ID | 3911056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3721785 |
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| End bp | 3722690 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637885157 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_486862 |
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| Protein GI | 86750366 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAAT TCGACGAAAC CGAGCTGACC GAAGCCGTCG TCGCGAGCTT CGACGATACG
CCTGATCCGC GGCTCAAGCA TCTGATGCGC GAACTGGTCC GTTCGCTGCA CGACTATGTC
CGCCGCACCG GCCTGACCTT CGAGGAGTGG CAGAAAACGA TCGATTTCCT CACCCGTACC
GGGCAGAAAT GCACCCCGAG CCGGCAGGAG TTCATCCTGC TGTCGGACGT GCTCGGCGTC
TCGATGCTGG TCGATGCGGT CAACCATCGC GAGCGCGGCG GCGCCACGGA GACCACGGTG
CTGGGGCCGT TCTACGTCGG CGAGCACAAA CCGATGCCGC ATGGCGCCGA TATTGCCGAA
GGTGTCGAGG GCGAGCGGAT GTATGTCCAG AGCCGTGTCA CCGATCTTTC CGGCAATCCG
TTGGCCGGCG TGCCGGTCGA CGTCTGGCAC GCCGATGACG ACGGCTTCTA TGATTCGCAG
AAACAGTCCT ACGCCGAGGA GGGCCCGTCA TTGCGCGCGC GGTTCGTCAC CGACGGCGAC
GGGCGGATCG CGTTCCGCAC CATCCTGCCG TGCAGCTATC CGATCCCGAT CGACGGTCCG
GTCGGCGAAC TGATCCTCGC CTCGCAGCGG CATCCGATGC GGCCGGCGCA CGTGCATTTT
CTGGTCGATG CGCCGGGCTA CGAGCCGCTG ATCACGCATG TGTTCATCGA GGGCGACAAA
TATCTCGAGT CCGACGCGGT GTTCGGCGTC AAGGACGACC TGATTTCGAC CATTGAATTG
CGCGATGATG CGGTGATGCC GGATGGCCGC GCGGCGTCGG GGCCGTGGCA TTTGATGACC
TATGAGTTCC GGCTGAAGCC GGGCAGGGGC GCGGCGCCGA AGCCGATGAT GGCGGCGGCG
GAGTGA
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| Protein sequence | MPQFDETELT EAVVASFDDT PDPRLKHLMR ELVRSLHDYV RRTGLTFEEW QKTIDFLTRT
GQKCTPSRQE FILLSDVLGV SMLVDAVNHR ERGGATETTV LGPFYVGEHK PMPHGADIAE
GVEGERMYVQ SRVTDLSGNP LAGVPVDVWH ADDDGFYDSQ KQSYAEEGPS LRARFVTDGD
GRIAFRTILP CSYPIPIDGP VGELILASQR HPMRPAHVHF LVDAPGYEPL ITHVFIEGDK
YLESDAVFGV KDDLISTIEL RDDAVMPDGR AASGPWHLMT YEFRLKPGRG AAPKPMMAAA
E
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