Gene RPB_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3254 
Symbol 
ID3911055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3720924 
End bp3721769 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content69% 
IMG OID637885156 
Productaldo/keto reductase 
Protein accessionYP_486861 
Protein GI86750365 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTGGGG ACACGCGCAA ATTCGGCCGG GGCGGGCCGG AGATTGCGCC GATCGGACAG 
GGCACCTGGT ACATCGACCG GGGTGACCGG ACGGCGGCGA TCGCCGCGCT GCGGCGCGGC
CTCGACCTCG GCATGACGCA TATCGACACC GCCGAGATGT ACGGCGATGC CGAGCCGCTG
GTGGCGGAGG CCATCGACGG CCGGCGGGAC CAGGTGTTCC TGGTCTCGAA GGTGCTGCCG
AGCAATGCCT CGCGGCGCGG CACCGTCGCC GCTTGCGAGC GCTCGCTGAA GCGGCTGAAG
ACCGACCGGC TCGACTGCTA TCTGCTGCAT TGGCGCGGGC AATATCGGCT GGCGGAAACC
GTGGCGGCGT TCGAGGAACT GGTCGCCGCC GGCAAGATCC GGTCATGGGG CGTCAGCAAT
TTCGACGTCG GCGATCTGTG GGAACTGCTC AAGGTCGCGG GGCCGGACAG GATCGCCTGC
AATCAGGTGC TGTATCATCT GCGCGAGCGC GCGATCGAGC ATGCGGTGAT CCCGTGGTGC
GAGGCGCACG GCGTTGCGGT CACCGCCTAT TCACCATTCG GTCATGACGA GTTTCCCCTG
CCGCGCAGCA CGGAGGGGCG GCTGCTGCAG TCGATCGCCG AGGCCCATGG CGCCACGCCA
CGGCAGGTGG CGCTGGCGTT TCTGACCCGG CGGCCGTCAT TGTTCGCGAT CCCGAAGGCT
GCCGACCCGG CGCATGCGGC CGACAATGCC GCGGCCGGAT CGCTGCGGCT CTCCGATGAC
GAGATCGCGG CGATCGACCA GGCCTGTCCG CTCGGGCCCG AACCGGCCAG CCTGCCGATG
CTGTGA
 
Protein sequence
MSGDTRKFGR GGPEIAPIGQ GTWYIDRGDR TAAIAALRRG LDLGMTHIDT AEMYGDAEPL 
VAEAIDGRRD QVFLVSKVLP SNASRRGTVA ACERSLKRLK TDRLDCYLLH WRGQYRLAET
VAAFEELVAA GKIRSWGVSN FDVGDLWELL KVAGPDRIAC NQVLYHLRER AIEHAVIPWC
EAHGVAVTAY SPFGHDEFPL PRSTEGRLLQ SIAEAHGATP RQVALAFLTR RPSLFAIPKA
ADPAHAADNA AAGSLRLSDD EIAAIDQACP LGPEPASLPM L