| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3247 |
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| Symbol | |
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| ID | 3911048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3709231 |
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| End bp | 3710940 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885149 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_486854 |
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| Protein GI | 86750358 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.652611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACG GATTGCGCAA GGGGCTGACC AGCTACGGCG ACGCCGGTTT TTCGCTGTTC
CTGCGCAAGG CGTTCATCAA GGCGATGGGC TATTCCGACG ACGCGCTGGA GCGGCCGATC
GTCGGCATCA CCAATACCCA CAGCGATTAC AATCCGTGCC ACGGCAACGT GCCGCAGATC
ATCGAGGCGG TGAAGCGCGG CGTGATGCTG GCGGGCGCGA TGCCGATGGT GTTTCCGACC
ATCTCGATCG CCGAGAGCTT CGCGCATCCG ACCTCGATGT ATCTGCGCAA TCTGATGGCG
ATGGACACCG AGGAGATGAT CCGCGCCCAG CCGATGGATG CGGTGGTAGT GATCGGCGGC
TGCGACAAGA CGCTGCCGGC GCAGATCATG GCGGCGGTGT CGGCGGATCT GCCGACGGTG
GTGATCCCGG TCGGGCCGAT GGTGGTCGGC CATCACAAGG GCGAAGTGCT GGGTGCCTGC
ACCGACTGCC GGCGGTTGTG GGCGAAGCAT CGCGCCGGTG AGATCGACGA GGCGGAGATC
GAGGCCGTCA ACGGCCGGCT GGCGCCGTCG GTCGGCACCT GCATGGTGAT GGGCACCGCC
TCGACGATGG CGTGTCTCAC CGAGGCGATG GGCCTGTCGC TGCCGATGAG CGCGACGATC
CCGGCGCCGC ATGCCGAGCG GTTTCGCTCG GCGGAAGAAA GCGGCAGGGT CGCGGCTGCG
ATGGCCAAGG CGAAAGGCCC GAAGCCGAGC GATCTGCTGA CCCCCGCCGC GTTCCGCAAC
GCGCAAGTCG TGCTGCAGGC GATCGGCGGC TCGACCAACG GACTGATTCA TCTCACCGCG
ATCGCCGGCC GCGTGCCGCA TAAGATCGAC CTCGACGGTT TCGACCGGAT CGGCCGCGAC
GTGCCGGTGC TGGTCGATCT GAAGCCGTCG GGCGATCACT ACATGGAGCA TTTTCATCAC
GCCGGCGGCG TGCCGAAGCT GATGGCGCAG CTCGGCGAAC TGATCGATCT CGACGCGCGG
ACGATCACCG GCGCGCCGCT GCGCGACATC GTCGCCAGGG CCGAACACGT GCAGGGCCAG
GACGTGATCC GCTCGCGCGA CAATCCGATC CGGCGCGAGG GCGGGCTCGC GATGCTCACC
GGCAATCTGG CGCCGCGCGG CGCGGTGATC AAACACGCCG CCGCGTCGCC GCAACTGATG
CAGCACACCG GCCGCGCCGT GGTGTTCGAC TCGGTCGAGG ACATGACGCT GCGGATCGAC
GATCCCGATC TCGACGTTGC GGCCGACGAC GTGCTGGTGC TGCGCAATGC CGGGCCGCGC
GGCGCGCCGG GGATGCCGGA GGCGGGCTAT CTGCCGATCC CGATGAAGCT GGCGCGGGCG
GGCATCAAAG ACATGGTGCG CATTTCGGAC GCGCGGATGA GCGGCACCGC GTTCGGTACC
ATCGTGCTGC ACATCACGCC AGAGAGCGCG GATGGTGGGC CGCTGGCGCT GGTCGAAACC
GGCGACCGGA TCGCGCTGGA TGTCGCGGCG CGGCGGATCG ATCTGTTGGT TGACGAAAGC
GAACTCGCGC GCCGCCGTGC CGCATTGTCG TCGTCAGCCG CGGCGCGGCC GACGCGCGGC
TATGCGCAAC TGTTTCACGA CACCATCCTG CAGGCCGACG AGGGCTGCGA TTTCGATTTT
CTCACCGCAG CCGGGCGCAG CGAGCGTTGA
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| Protein sequence | MADGLRKGLT SYGDAGFSLF LRKAFIKAMG YSDDALERPI VGITNTHSDY NPCHGNVPQI
IEAVKRGVML AGAMPMVFPT ISIAESFAHP TSMYLRNLMA MDTEEMIRAQ PMDAVVVIGG
CDKTLPAQIM AAVSADLPTV VIPVGPMVVG HHKGEVLGAC TDCRRLWAKH RAGEIDEAEI
EAVNGRLAPS VGTCMVMGTA STMACLTEAM GLSLPMSATI PAPHAERFRS AEESGRVAAA
MAKAKGPKPS DLLTPAAFRN AQVVLQAIGG STNGLIHLTA IAGRVPHKID LDGFDRIGRD
VPVLVDLKPS GDHYMEHFHH AGGVPKLMAQ LGELIDLDAR TITGAPLRDI VARAEHVQGQ
DVIRSRDNPI RREGGLAMLT GNLAPRGAVI KHAAASPQLM QHTGRAVVFD SVEDMTLRID
DPDLDVAADD VLVLRNAGPR GAPGMPEAGY LPIPMKLARA GIKDMVRISD ARMSGTAFGT
IVLHITPESA DGGPLALVET GDRIALDVAA RRIDLLVDES ELARRRAALS SSAAARPTRG
YAQLFHDTIL QADEGCDFDF LTAAGRSER
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