| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3242 |
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| Symbol | |
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| ID | 3911043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3704867 |
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| End bp | 3705619 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885144 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_486849 |
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| Protein GI | 86750353 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA CTCTGCAAGG CAAGGTGGCG TTGGTGAGCG GCGCGTCGAA GGGCATCGGC
GCCGAGATCG CGCTGCAGCT CGCCGCCCAA GGCGCCGCCG TCGCCGTCAA CTACGCCTCC
AGCAAACAGG GCGCCGACGC GGTGGTGGCG CAGATCGCGG CCGCCGGCGG CAAGGCCGTT
GCGGTGCACG GCAATCTCGC CGATCCGACC GCGATCAAGC CGATGATCGA TGCCACCGTG
AAGGCACTCG GCCCGATCGA CGTGCTGGTG AACAATGCCG GCGTCTACGA CATGCTGCCG
CTCGACGCGA TCACGCCGGA GCATTTTCAC CGCCAGTTCG ATCTCAACGT GCTCGGCCTG
CTGCTGGTGA CGCAGGCGGC CGCCCGGCAG TTCAGCGCGG CCGGCGGCAG CATCATCAAC
ATCTCCTCCG GCATCTCGAC CCTCGCGCCG CCGAATTCCG CGGTCTACAC CGCGACCAAG
GCGGCAGTGG ATGCGATCAC CGCAGTGCTG GCGCGCGAGC TGGCGCCGCG CAAGATCCGC
GTCAACGCGG TCAATCCCGG CATGGTCGTC ACCGAAGGCG TCAAGACGGC CGGGTACGAC
CAGGGCGCGA TGCGGCAATG GGTCGAAGCG ACGACGCCGC TCGGCCGCGT CGGCAAGGCC
GAAGAAATCG CCGCCGTCGT CACTTTCCTC GCCGGTGAAG GCGCCTCTTA CGTCACCGGC
GAAACGCTGC ACGTCACCGG CGGCCCGCGC TAG
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| Protein sequence | MTKTLQGKVA LVSGASKGIG AEIALQLAAQ GAAVAVNYAS SKQGADAVVA QIAAAGGKAV
AVHGNLADPT AIKPMIDATV KALGPIDVLV NNAGVYDMLP LDAITPEHFH RQFDLNVLGL
LLVTQAAARQ FSAAGGSIIN ISSGISTLAP PNSAVYTATK AAVDAITAVL ARELAPRKIR
VNAVNPGMVV TEGVKTAGYD QGAMRQWVEA TTPLGRVGKA EEIAAVVTFL AGEGASYVTG
ETLHVTGGPR
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