Gene RPB_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3239 
Symbol 
ID3911040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3702926 
End bp3703747 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID637885141 
Productchloride peroxidase 
Protein accessionYP_486846 
Protein GI86750350 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.826064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGT TCACCACCCG CGATGGGACC CGGCTGTTCT ACAAAGATTG GGGCACCGGC 
CAGCCGATCC TGTTCGCGCA TGGCTGGCCG CTGTCGTCAG ATGCCTGGGA CCAGCAGATG
CTGTTCTTCG GCGCGCAGGG CTATCGCGTG ATCGCCCATG ACCGGCGCAG CCACGGCCGG
TCCGACCAGA CCTGGGACGG CAACCACATG GATCAGTACG CCGACGATCT GGCCGAGCTG
ATCGCGGCGC TCGACCTGCG CGATCTGATC CTGGTCGGCC ATTCGACCGG CGGCGGCGAG
GTGGCGCACT ATCTCGGCCG GCACGGCACG TCCCGCGTCG CGAAGGTGGT GCTCGTCGGC
GCGGTGCCGC CGCTGATGCT GCAGACCGCC GCCAATCCGC ACGGCACGCC GCTGTCGGTG
TTCGACGGCA TCCGCGACGG CACCGCCAAG AACCGGTCGC AGTTCTTCTT CGACCTGACC
GTGCCGTTCT ACGGCTTCAA CCGCGACGGC GTCGCGAGCA ACGACGGCCT GCGCGAAAAC
TTCCGGCGGA TCGGGCTGCA GGGCGGCATC AAGGGGCAGT ACGACTGCAT CCGTGAATTC
TCCGAGGTCG ACTACACCGA GGACCTCGAG CGGATCGACC GGCCCACCCT GATCATCCAC
GGCGATGACG ACCAGATCGT GCCGATCGAC GCGTCGGCGC ATCGCGCGGC AGAACTCGTC
CCCAACGCGA CGCTGAAGGT CTATCCCGGC GCCCCGCATG GCCTCGCCGA AACCGAAGCC
GACCGTTTCA ACGCCGACGT GCTGTCCTTC ATCCGCGCCT GA
 
Protein sequence
MTTFTTRDGT RLFYKDWGTG QPILFAHGWP LSSDAWDQQM LFFGAQGYRV IAHDRRSHGR 
SDQTWDGNHM DQYADDLAEL IAALDLRDLI LVGHSTGGGE VAHYLGRHGT SRVAKVVLVG
AVPPLMLQTA ANPHGTPLSV FDGIRDGTAK NRSQFFFDLT VPFYGFNRDG VASNDGLREN
FRRIGLQGGI KGQYDCIREF SEVDYTEDLE RIDRPTLIIH GDDDQIVPID ASAHRAAELV
PNATLKVYPG APHGLAETEA DRFNADVLSF IRA