| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3211 |
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| Symbol | |
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| ID | 3911012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3672616 |
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| End bp | 3675129 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885113 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_486818 |
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| Protein GI | 86750322 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.156633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCG ATACGACGCA TCCGAGATTC GCAAAGCGTC GCGGCTGGCG ATGGCTCTAT
GTCGGCCTGG CGACATTGGT CGGCGTACTC GGACTGATCA TGGCCGTGCT CGGCGGCTGG
CTGATCGCAC TCGGCGGCTC CTTCTACTAT CTTGGCGCGG GCGCGTTGCT GGCGCTCGGC
GCAGCCCTGG TCTGGACAGG CCGCGATCGC GCGGCCTTCC TGCTGTTCGC CGGCGCTTTC
CTGCTCACAA TTATCTGGTC GCTGGTCGAG ATCGCCGGCA AAGGCTGGCT GCCGGCCTGG
GGCATCGATT TCGCCGGCCG CGTCGGCGTT CTTGCAGCGC TGTTGGCCGG CGTCGGCCTC
GCTTATCTGC TGTGGCGCGC CGCGCCGCGT TCGACGCCGC GCAAACTCGC GCTGGCCTCA
GCACTTAGTA TCTTTATCGC TCTGGGTGGG CTCGTCTATG CAAGCTGGGA AACCACCGAA
CCGGCGAGCG AACGCGACAG CGCGGCGAGC GGCGCTCCCG CCGGCGGCGG CGCCATGCAG
GAAGCCGGCG CGGACTGGAC CGCGTTCGGC GGCACCACCG GAGGACGCCG CTATTCGAGC
TTGAGCCAGG TGTCCACCGC CAACGTCACC ACCTTGCAGG AAGCCTGGAC GTTTCGCAGC
GGCGATCTCA ATCCCGATCC CGGGCGCGTC TTCTATTCCG CCCAGAACAC GCCGATCAAG
GTCGGGGACC TGCTCTACAC CTGCACGCCG ACCAATCGCG TGTTCGCACT CGATCCGGGC
ACCGGCAACG TGCGCTGGAG TCACGACCCC AAGGTGCCGG CGAGCGCGAT GGAGTCGCTG
TTCACCGCGG CGTGTCGCGC CGTCGCCTAT TTCGACGATG GCGAAGCCGC GGGTGCGCCG
GAATCGATTG CAACGATGCC CGCTGTTCCT GGCGCGATTC GTCCGGTGCC GCGCGGGGGC
AGCCAGTGTC ACCGGCGCAT CTTCGTCTCG ACGGCGGACG GCCGGCTGAT CGCGCTCGAT
GCGGTCGCCG GCTTCGTTTG CCGGGAGTTC GGCGAAGACG GCGTCGTCGA TTTGACCGCC
GGCATGGGAC TGCGCGAGAA GGGCTTCGCC TCCTCCACCT CGGGCGCGAC CATGGCGGGC
GGGCTGCTCA TTCTGGGCCA TCAGGTGAGC GACAACCAGA GACGGGATGC GCCGTCCGGC
GTGGTGCGAG CCTATGACGC GCGCACCGGC GAACTCCGCT GGGCCGTGGA CGCACTTCGT
CCCGACGCCC AGGCCAAGCT CGCGCCCGGC GAGATCTATC CCCGCGGCAC GCCGAACGTC
TGGAACATCA TTTCGGCGGA CGAATCATTG GGGCTGGCCT TCCTCGCCAC CGGCAATGCC
GCCGCCGATC AATGGGGTGG CAACCGGACC CCGGAAGAAG ACCGCTTCAC CGATGCTGTC
GTCGCGGTCG ATCTGCAGAC CGGCGCGACG CGCTGGGTCT ACACCACCGT CACCCACGAC
CTTTGGGACT ACGACCTCGG CGCTCAGCCG ATGCTGGTCG ACGTCACCAT CAACGGCTCT
GCCCATCGAG CCATCATGCA GGCCAGCAAG ACCGGCAACC TGTTTCTGCT GGACGCCCGC
ACCGGCGAGC CGCTCCGCCC GGTCGAGCAG CGCCCTACCC CGCAGGGCCC GCCTCCGGGC
GATTGGGTGG CGCCGACCCA GCCGCAATCC GTCTTCTTTC CGAACATCGG TGGCGTGCCG
GGTCGCGATC CCGAGCAAAT CGACGCGCGT CATGCCTTCG GGCTGACGCC GATCGACGCT
GCGCTCTGCC GCATCAGTTT CCACCGTCAC CGCTACGAGG GCATCTTCAC CCCGCCCACG
GTCGACAAGG CAGGCCTGCT GCTGTTTCCG GGCACGGTCG GTGGCATGAA TTGGGGCGGG
CTCGGCTACG ACCCGCAGCG TCGCCTGATC ATCGCCAACA ATTCCCGGCT GCCCAACCTG
GTGGTTCTGC ATCCGCGCGC GGACGTCGTC GATCAGCCTG TCGGATCGGG CGGCGCCAGA
CCGGATCAGA AAGTCGCCCC CCACTCCGGG ACGCCCTTCG CCGTGACCCG ACCGATCTGG
TGGTCGCCGC TCAGGGTGCC GTGCATCTCG CCGCCCTGGG GCTACATCTC GGCGACCAAT
ATCGACACCG GCCAGATCGT CTGGTCGAAG CCCTTGGGCA CCGGCTTCGA TTCCGGTCCG
CTCGGTATTC CCACCCGTCT CAAGATCGCG ACGGGAACGC CGAACCTCGG CGGCCCGCTG
GTGACGGCCG GCGGCTTGAC CTTCATCGGC GCGACGCAGG ACGATTTCCT GCGCGCGTTC
GAGACCGCCA CCGGACGGCT GCTGTGGGAA GCCCGGCTGC CCGCCGGCGC GCAGGCCGGC
CCGATGAGCT ACGCGCACAA CGGTCGGCAA TACATCGCGG TCACGGCGAC CGGTCACGCC
CGCTTCGGCA CCACGCCCGG CGATTATCTC AAGGTCTACG CCCTGCCCCA ATAG
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| Protein sequence | MPADTTHPRF AKRRGWRWLY VGLATLVGVL GLIMAVLGGW LIALGGSFYY LGAGALLALG
AALVWTGRDR AAFLLFAGAF LLTIIWSLVE IAGKGWLPAW GIDFAGRVGV LAALLAGVGL
AYLLWRAAPR STPRKLALAS ALSIFIALGG LVYASWETTE PASERDSAAS GAPAGGGAMQ
EAGADWTAFG GTTGGRRYSS LSQVSTANVT TLQEAWTFRS GDLNPDPGRV FYSAQNTPIK
VGDLLYTCTP TNRVFALDPG TGNVRWSHDP KVPASAMESL FTAACRAVAY FDDGEAAGAP
ESIATMPAVP GAIRPVPRGG SQCHRRIFVS TADGRLIALD AVAGFVCREF GEDGVVDLTA
GMGLREKGFA SSTSGATMAG GLLILGHQVS DNQRRDAPSG VVRAYDARTG ELRWAVDALR
PDAQAKLAPG EIYPRGTPNV WNIISADESL GLAFLATGNA AADQWGGNRT PEEDRFTDAV
VAVDLQTGAT RWVYTTVTHD LWDYDLGAQP MLVDVTINGS AHRAIMQASK TGNLFLLDAR
TGEPLRPVEQ RPTPQGPPPG DWVAPTQPQS VFFPNIGGVP GRDPEQIDAR HAFGLTPIDA
ALCRISFHRH RYEGIFTPPT VDKAGLLLFP GTVGGMNWGG LGYDPQRRLI IANNSRLPNL
VVLHPRADVV DQPVGSGGAR PDQKVAPHSG TPFAVTRPIW WSPLRVPCIS PPWGYISATN
IDTGQIVWSK PLGTGFDSGP LGIPTRLKIA TGTPNLGGPL VTAGGLTFIG ATQDDFLRAF
ETATGRLLWE ARLPAGAQAG PMSYAHNGRQ YIAVTATGHA RFGTTPGDYL KVYALPQ
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