Gene RPB_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3208 
Symbol 
ID3911009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3669572 
End bp3670192 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content63% 
IMG OID637885110 
ProductDSBA oxidoreductase 
Protein accessionYP_486815 
Protein GI86750319 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAT TCTTCTTCGA CTGCTCCAGT CCCTGGACCT ATCTGGCCTT CCACAACATC 
CAGCCGCTGG CGAAGGAGGC GGGGGCGGAG ATCATTTGGC GGCCGATCCT GGTCGGCGGC
ATCTTCAATT CGGTCAATCC AAGCGTATAC GAATCGCGCA AAACGCCGGT GCCGCTGAAG
GCGCGCTACA TGGTCAAGGA CCTCGGCGAC TGGGCGCGCT CGTCCGGCCT TGCGATCAAG
ATGCCGCCTT GGGTGTTCCC GGTGAACAGC GTCAAGGCGA TGCGCGGCTG CCTGTGGCTG
CTGCGCGACA AGCCGGATGC GATGGTGCCG TTCGCCACTG CGGTGTTCGA GGCCTATTGG
GGCGATGATC AGGACATTTC CAACGACGAG GTGCTGAGCG CGATCTGCAC CCGCGTCGGC
CTCGATCCGC AGGCGTTGTT CGCCGGCATC GCCGAACCCG CGATCAAGGA TCAGCTCAAG
GCCAACACCG ACGAGGTGAT GGCGCGCGGC GGCTTTGGTT CGCCGACGAT CTTCGTCGAC
AAGACGGACA TGTATTTCGG CAACGACCGC TTGCCACTGG TGCGCGAGGC GCTGATGCGC
CGCAAAGCGA GCGCCGCCTG A
 
Protein sequence
MLEFFFDCSS PWTYLAFHNI QPLAKEAGAE IIWRPILVGG IFNSVNPSVY ESRKTPVPLK 
ARYMVKDLGD WARSSGLAIK MPPWVFPVNS VKAMRGCLWL LRDKPDAMVP FATAVFEAYW
GDDQDISNDE VLSAICTRVG LDPQALFAGI AEPAIKDQLK ANTDEVMARG GFGSPTIFVD
KTDMYFGNDR LPLVREALMR RKASAA