Gene RPB_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3203 
Symbol 
ID3911004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3664350 
End bp3665432 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID637885105 
Productalanine racemase-like 
Protein accessionYP_486810 
Protein GI86750314 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CGCTCGCCGC CAAAATCGCC CGCGACATCG GCACGCCCGC TTTGGTGATC 
GACATGGACC GGGTCGAGCG CAACATCGCG CGGGTGCAGG GACTGTGCGA CGCGGCCGGC
GTCGCCAACC GGCCGCATAT CAAGACCCAC AAATCGCCGC TACTGGCGCA GATGCAGATC
AAAGCCGGCG CCCGCGGCAT CACCTGCCAG AAGCTCGGCG AAGCCGAAGT GATGGCCGAG
GCCGGCATCG ACGACATCCT GATCAGCTAC AATCTCATCG GCGAGGAGAA GATGGCACGA
CTCGGCGCGC TGCACGAACG CGCGCAGATG ATCGTCGCCG CCGACAACGA GGTGGTGATC
GCCGGCCTCC CCGCCGCTGC GGCGCGCGCC GGCCGCCCGC TCGGCGTCGT GGTCGAATGC
GACACCGGCC GGCAGCGCGC CGGCGTCGAG ACGCCGGCGG AAGCGATCGC GCTCGCCCGC
ACGATCGCGG CCTCCGACGG GCTCGTGTTC AAGGGCTTGA TGCTGTACCC GACCGAGGAC
GGCTGGCCGC AGGCGCAGCG CTTCTTCGAC GAGGCGCTGG CCGGCATCCG CGCGCATGGC
CTCGACGCGG AAATCGTCTC GACCGGCGGC TCGCCGAATT TGAAGAACCT CGGCCAGCTC
GCAGGCGCCA CCGAGCATCG TCCCGGCACC TACATCTACA ACGACCGCAT GCAGGTCGAA
GCCGGCGTCG CATCATGGGA CGATTGCGCG CTGACGATCT ATTCCACCGT GGTCAGCCGC
GCTGCACCCG AGCGCGGCAT CCTCGACGCC GGCTCGAAGA CGCTGACCTC CGACCCCGGC
GGCGGCCTCG ACGGTTTCGG CCTCATTCTC GATCATCCCG AAGCCCGCAT CGCCCGCTTC
GCCGAGGAGC ACGGCTTCCT CGATCTCTCC CGCAGCAACT CCCGCCCGGC CATCGGCGAC
GTCGTGCGGA TCGTACCCAA CCACGTCTGC GTCGTCGTCA ACATGGTCGA CGAGGTGGTG
ATGGTCCGCG GCGACGAGAT CGTCGGGATG CTGCCGGTCG CGGCACGCGG GAAGCTGAAG
TAA
 
Protein sequence
MTTPLAAKIA RDIGTPALVI DMDRVERNIA RVQGLCDAAG VANRPHIKTH KSPLLAQMQI 
KAGARGITCQ KLGEAEVMAE AGIDDILISY NLIGEEKMAR LGALHERAQM IVAADNEVVI
AGLPAAAARA GRPLGVVVEC DTGRQRAGVE TPAEAIALAR TIAASDGLVF KGLMLYPTED
GWPQAQRFFD EALAGIRAHG LDAEIVSTGG SPNLKNLGQL AGATEHRPGT YIYNDRMQVE
AGVASWDDCA LTIYSTVVSR AAPERGILDA GSKTLTSDPG GGLDGFGLIL DHPEARIARF
AEEHGFLDLS RSNSRPAIGD VVRIVPNHVC VVVNMVDEVV MVRGDEIVGM LPVAARGKLK