| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3198 |
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| Symbol | |
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| ID | 3910999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3656894 |
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| End bp | 3659278 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885100 |
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| Product | carbon-monoxide dehydrogenase |
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| Protein accession | YP_486805 |
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| Protein GI | 86750309 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.294023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCA TGCAGGACCG TCCTTCGAAC CTGTCGTCCG ACACCGCCAT CGCGCTGCAA
AAATTCGGAA TTGGCCAGCC GGTGCGACGC AAGGAGGACG ACACGCTGCT GCGCGGCAAG
GGCCGCTATA CCGACGACTG CAACCTGCCC GGCCAGCTCA CCGCGGTGAT GGTGCGCAGC
CCGCACGCTC ACGGCATCAT CCGCGGCATC GACGCCGAAG CGGCGCGGGC GATGCCCGGC
GTCGTCGGCG TCTACACCGG CGCCGATCTC GCCGCGGCCG GCTATGCCCC GTTCAGCTGC
GGGCTGCCGA TGAAGAGCCG CGACGGCACG CCGCTGCTGC AGACCAACCG CCCGGCGCTG
GCGACCGACA AGGTGCGCTT CGTCGGCGAT CCGGTGGCGT TCGTGGTCGC CGAGACGGCG
ATTCAGGCGC GCGACGCCGC CGAATCGGTC GCGCTCGACA TCGCGCCGCT GCCGGCGGTG
ACCGACGCCG ACGACGCGAT CAAGCCCGGC GCGCCGCAGC TCTACGATCA CATCCCGAAC
AACATCGCGC TCGACTATCA CTTCGGCGAC GCCGCGGCCG TCGAGGCCGC CTTCGCCTCC
GCCGCGCATG TCACCACGCT CGACATCGAG AACACCCGGG TCGCCGCGGT GCCGATGGAG
CCGCGCACCG GGCTCGCCAG TTACGACCGG CAGAACGGCC GCTATACCAT CCAGCTCCCG
ACCCAGGGCG TCGCCGGCAA CCGCAACACG CTGGCGAAGC TGCTCGGCGT GCCGACCGAC
AAGGTGCGGG TGCTGACCGG CCAGGTCGGC GGCTCGTTCG GGATGAAGAA CATCTCCTAT
CCCGAATACA TCTGCATCCT GCACGCGGCG AAAGCGCTCG GCCGGCCGGT GAAGTGGACC
GACGAACGCT CGTCGGCGTT CCTGTCCGAC AGCCACGGCC GCGGCCAGCA GATCCGCGCC
GAGCTGGCGC TCGATGCCGC CGGCAAGTTT CTGGCGATCC GCCTCAGTGG CACCGGCAAT
CTCGGCGCCT ACATCACCGG CGTGGCGCCG CTGCCGCTGT CGCTCAACAC CGGCAAGAAC
ATCGGCAGCG TGTATCGCAC GCCGCTGCTC GGCGTCGACA TCAAATGCGT CGTCACCAAC
GTCACGCTGA TGGGCGCCTA TCGCGGCGCC GGCCGGCCCG AGGCGAACTA CTTCCTGGAG
CGGCTGATCG ATCGCGCCGC CGACGAGATC GGCATCGACC GCCTCGCCTT GCGCAAGCGC
AACTTCATCA AGCCGCAGCA ATTGCCGTTC ACCGCCTGCT CGGGCGTCAC CTATGACAGC
GGCGATTTCG GCGGCGTGTT CGCGCAGGCG CTGGAGCTGT CGGACCATGC CGGCTTCGCC
CAACGCAAGA AGGAGAGCCG CAAGCGCGGC AAACTGCGCG GCATCGCGGT CGGCTCCTAT
CTCGAAGTCA CCGCCCCGCC GAGCGCCGAA CTCGGCAAGA TCGTGTTCGA GGAAGACGGC
ACAATTCGGC TGATCACCGG CACGCTCGAC TACGGCCAGG GCCACGCCAC GCCGTTCGCG
CAGGTGCTGA GTACGTATCT CGGCGTGCCG TTCGACCGCA TCCGGCTCGA ACAGGGCGAC
AGCGACGTCG TCCACACCGG CAACGGCACC GGCGGCTCGC GCTCGATCAC CGCCAGCGGC
ATGGCGATCG TCGAGGCGTC GCAGCAAGTG ATCGCCAAGG GCAAGGCCGC GGCGTCGCAT
CTCTTGGAGA CCGCGGAGGC CGACATCGAA TTCGCCGATG GTCGCTTCAC CGTGGCGGGC
ACCGATCGCA GCATCGGCAT CATGGAGCTG GCGCAGCGGC TGCGCGAGGC GAAACTCCCC
GACGGCGTGC CGGCGTCGCT CGACGTCGAT CACACCGTCA AGGCGGTCCC CTCCGCCTTC
CCCAATGGCT GCCACGTCGC CGAGGTCGAG ATCGATCCCG ACACCGGCGT CACCCGCGTG
GTGCGCTACA CCGCGGTCAA TGATTTCGGC GTCGTGGTCA ATCCGATGAT CGTCGCAGGC
CAGTTGCACG GCGGCGTCGC GCAAGGCATC GGCCAGGCGC TGATGGAGAA GATGTCCTAT
GACGGCGACG GCCAGCCGAT CACCGGCTCG CTGCAGGACT ACGCGCTGCC GCGCGCCGAG
GACATTCCGC CGATGGCGGT CGGCGATCAC CCCGTGCCTG CGCCCGGCAA TCCGCTCGGC
ACCAAGGGCT GCGGCGAAGC CGGCTGCGCC GGCTCGCTGG CGAGCGTCGT CAATGCCGTG
CTCGACGCGC TGAAAGACCA CGGCGTCAAA TCCCTCGACA TGCCGCTGAC CTCGGAGAAG
GTCTGGCGCG CGATCCGGGA GGCGAAGGAG ACGGCGGCGG CGTGA
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| Protein sequence | MSFMQDRPSN LSSDTAIALQ KFGIGQPVRR KEDDTLLRGK GRYTDDCNLP GQLTAVMVRS
PHAHGIIRGI DAEAARAMPG VVGVYTGADL AAAGYAPFSC GLPMKSRDGT PLLQTNRPAL
ATDKVRFVGD PVAFVVAETA IQARDAAESV ALDIAPLPAV TDADDAIKPG APQLYDHIPN
NIALDYHFGD AAAVEAAFAS AAHVTTLDIE NTRVAAVPME PRTGLASYDR QNGRYTIQLP
TQGVAGNRNT LAKLLGVPTD KVRVLTGQVG GSFGMKNISY PEYICILHAA KALGRPVKWT
DERSSAFLSD SHGRGQQIRA ELALDAAGKF LAIRLSGTGN LGAYITGVAP LPLSLNTGKN
IGSVYRTPLL GVDIKCVVTN VTLMGAYRGA GRPEANYFLE RLIDRAADEI GIDRLALRKR
NFIKPQQLPF TACSGVTYDS GDFGGVFAQA LELSDHAGFA QRKKESRKRG KLRGIAVGSY
LEVTAPPSAE LGKIVFEEDG TIRLITGTLD YGQGHATPFA QVLSTYLGVP FDRIRLEQGD
SDVVHTGNGT GGSRSITASG MAIVEASQQV IAKGKAAASH LLETAEADIE FADGRFTVAG
TDRSIGIMEL AQRLREAKLP DGVPASLDVD HTVKAVPSAF PNGCHVAEVE IDPDTGVTRV
VRYTAVNDFG VVVNPMIVAG QLHGGVAQGI GQALMEKMSY DGDGQPITGS LQDYALPRAE
DIPPMAVGDH PVPAPGNPLG TKGCGEAGCA GSLASVVNAV LDALKDHGVK SLDMPLTSEK
VWRAIREAKE TAAA
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