| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3195 |
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| Symbol | |
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| ID | 3910996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3653294 |
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| End bp | 3654766 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885097 |
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| Product | major facilitator transporter |
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| Protein accession | YP_486802 |
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| Protein GI | 86750306 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.619069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAG AACGACTGAT CCCGCTGATC GTGGCCGCCG CGCTGTTCAT GGAGAACATG
GACGCCACCG TGATCGCCAC GTCATTGCCG GCGATTGCCG CCGATATCGG CACCTCGCCG
CTGACGCTGA AGCTCGCGAT CACGTCCTAT CTGCTGTCGC TGGCGGTGTT CATCCCGGCC
TCCGGCTGGA CCGCCGACCG GTTCGGCGCC CGCACGGTGT TCTCGGCGGC GATCGCGGTG
TTCATGATCG GCTCGATCGG CTGCGCGCTG TCGCAGTCGA TCACCGATTT CGTGCTCGCG
CGCATCCTGC AGGGGCTCGG CGGCGCGATG ATGACGCCGG TCGGACGATT GGTGCTGCTG
CGCTCGATCG ACAAGAGCGC ACTGGTCGGC GCGATGGCGT GGATGACGGT GCCGGCGCTG
ATCGGCCCGG TGATCGGCCC GCCGCTCGGC GGCTTCATCA CCACCTACTT CTCGTGGCAC
TGGATCTTCC TGATCAACAT CCCGATCGGG CTCGCCGGGA TCTTCTTCGC GCAGCGCTAC
ATCGATCCGA TCCGCAGCGA CAATCCGGAG CGGTTCGACC TCTACGGCCT GGTGCTGGCC
GGCATCGGCC TCGCCGGCAT CGCCTTCGGC CTGTCGGTGG CGGGGCTCGG GCTGCTGCCC
TGGCAGGTCG TCGTGGCGCT GATCGCGATC GGCACGATCG CGATGACGCT GTATCTGCTG
CACGCCCGCC GCACCGCCTC GCCGGTGCTG GATTTCTCGC TGCTGCGGCT GACGACGCTG
CGCGCCAGCA TGACCGGCGG CTTCCTGTTC AGGCTCGGCA TCGGCGCATT GCCGTTCCTG
CTGCCGCTGT TGATGCAGAT CGGCTTCGGG CTGTCGCCGT TTCACTCCGG CCTCGTCACC
TTCGCCTCCT CGGCCGGGGC GATGGGGATG AAGCCGCTGG CGGCGCGGAT CATCCGCACC
TTCGGCTTCC GCAAGATCAT GACCATCAAC GCGCTGGTCA GCTCGGTGTT TCTCGCCGCC
TGCGCGCTGT TCACGCCGGC GACGCCGCTG CTGCTGATCA TGATCATCCT GCTGGTCGGC
GGCTTCTTCC GCTCGCTGCA ATTCACCGCG ATCAACACCG TCGCCTATGC CGAGGTGGAG
ACCGCGCAGA TGAGCCGCGC CACCACGCTG GTCAGCGTCG GCCAGCAGCT GGCGATCTCG
GCCGGCGTCG CGATCGGCGC GTTTGCGGTC GAATCCACGA TGGCGTGGCA CGGCACCACG
ACGCTCGGCG CCGACGATTT CGCGCCGGCC TTCGTCGTGG TCGCGGTGCT GTCGGCGTTG
TCGGCGTATT TCTTCTGGCG GATGCCGGAC GATGCCGGCA GCGAGATCTC GGGGCGGAAG
GCGATCGAGA TCTCGAGCCG GAAGGGCGCC GCCGGCGCCG CTGCCAAGAC CGCGACCGAA
GAAACCCAGA CCGCGCGCGA TCAGCGACTG TGA
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| Protein sequence | MNKERLIPLI VAAALFMENM DATVIATSLP AIAADIGTSP LTLKLAITSY LLSLAVFIPA
SGWTADRFGA RTVFSAAIAV FMIGSIGCAL SQSITDFVLA RILQGLGGAM MTPVGRLVLL
RSIDKSALVG AMAWMTVPAL IGPVIGPPLG GFITTYFSWH WIFLINIPIG LAGIFFAQRY
IDPIRSDNPE RFDLYGLVLA GIGLAGIAFG LSVAGLGLLP WQVVVALIAI GTIAMTLYLL
HARRTASPVL DFSLLRLTTL RASMTGGFLF RLGIGALPFL LPLLMQIGFG LSPFHSGLVT
FASSAGAMGM KPLAARIIRT FGFRKIMTIN ALVSSVFLAA CALFTPATPL LLIMIILLVG
GFFRSLQFTA INTVAYAEVE TAQMSRATTL VSVGQQLAIS AGVAIGAFAV ESTMAWHGTT
TLGADDFAPA FVVVAVLSAL SAYFFWRMPD DAGSEISGRK AIEISSRKGA AGAAAKTATE
ETQTARDQRL
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