| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3182 |
|---|
| Symbol | |
|---|
| ID | 3910983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3639353 |
|---|
| End bp | 3640576 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637885084 |
|---|
| Product | precorrin-6y C5,15-methyltransferase, subunit CbiE |
|---|
| Protein accession | YP_486789 |
|---|
| Protein GI | 86750293 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 |
|---|
| TIGRFAM ID | [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.874907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA CCGATGACAC GCCGACGCCG TGGCTGTCCA TCGTCGGAAT CGGCGAGGAT
GGCGTCGCGG GCCTGTCGGA CAAAGCACGC GCGCTACTGG CGAACGCCGA TCTCGTGATC
GGCGGCGAGC GGCACCTCGC GATGGTTGCC GCGCTCGGCA GGCCGACCCT GCCCTGGCGG
GTGCCGTTCG CCGTGTCGCT GCCGGACGTG CTGGCGCAGC GCGGCCGCAG TGTCGTCGTG
CTGTGCTCGG GCGATCCGTT CTGGCACGGC GCCGGCGCTG TGCTCGCCGA TCACCTCGCG
CCGAGCGAAT GGACCGCCCT GCCGGCGCCG TCGACGTTCT CCTGGGCGGC GGCAAGGCTC
GGCTGGCGGC TGGAAGAGAC GATCACGCTC GGCCTCCACG CCCGCCCCAT CACCATGCTG
CGGCCGCATC TGCAGCCCGG TTCTCGGCTC ATCGTGCTGG TGCGCGATGG TGCCGCGGTG
GCGCAGATCG CGGCCTATCT GACGGCGACG GGTTTTGGAC CGTCCAGCCT CACCGTGCTC
GAAGCGCTCG GCGGCCCGCG CGAGCGCATT CTCCGCGCAG CAGCGGCGAA CTATACACTC
ACCGACGTCG CAGCACCGGT CGCGATCGGC ATCGACGTGG TCGCGCAACC CGATTCCGCC
ATCATCCCAC ACGCAAGCGG CCTGCCGGAC GAGCTGTTCC AGACCGACGG CCAACTCACC
AAGCGCGCGA TCCGCGCGGT GACGCTGTCG AGCCTCGCCC CACGGGGCGG CGAATTGTTG
TGGGATATCG GCGCCGGCTC GGGCTCGATC GGCATCGAAT GGTTGCTGGC GGCGCGCAGC
AACCGCGCGA TCGGAATCGA AGCGCGGCCC GATCGGCTGG CTTGCGCCCG CGGCAATGCC
GACGCACTCG GCGTGCCGCA TTTCGATCTC CGCCTTGGGC AAGCGCCGGA AGCGCTCGCC
GACCTGCCGA CTCCGGACGC GGTGTTCATC GGCGGCGGCG CCGGCAATCC GGGCGTGCTG
GACGCGGTGT GGCAGGCGCT TCCACCCGGC GGACGGCTGG TGGTCAATGC CGTGACGCTG
GAAACCGAGG CGCTGCTGAT CGCCTGTCAC GGCCGCCACG GCGGCGAGTT GCTGCGGCTC
GGCGTCGAAC GCGCCGCGCC GGTCGGCGGG CTCACCGCCT GGCGCGCCGC GATCCCGGTG
GTGCAATGGA GCGTCCGCAA ATGA
|
|---|
| Protein sequence | MTATDDTPTP WLSIVGIGED GVAGLSDKAR ALLANADLVI GGERHLAMVA ALGRPTLPWR
VPFAVSLPDV LAQRGRSVVV LCSGDPFWHG AGAVLADHLA PSEWTALPAP STFSWAAARL
GWRLEETITL GLHARPITML RPHLQPGSRL IVLVRDGAAV AQIAAYLTAT GFGPSSLTVL
EALGGPRERI LRAAAANYTL TDVAAPVAIG IDVVAQPDSA IIPHASGLPD ELFQTDGQLT
KRAIRAVTLS SLAPRGGELL WDIGAGSGSI GIEWLLAARS NRAIGIEARP DRLACARGNA
DALGVPHFDL RLGQAPEALA DLPTPDAVFI GGGAGNPGVL DAVWQALPPG GRLVVNAVTL
ETEALLIACH GRHGGELLRL GVERAAPVGG LTAWRAAIPV VQWSVRK
|
|---|
| |