| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3180 |
|---|
| Symbol | |
|---|
| ID | 3910981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3637844 |
|---|
| End bp | 3638605 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637885082 |
|---|
| Product | precorrin-3B C17-methyltransferase |
|---|
| Protein accession | YP_486787 |
|---|
| Protein GI | 86750291 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1010] Precorrin-3B methylase |
|---|
| TIGRFAM ID | [TIGR01466] precorrin-3B C17-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.179883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.801014 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAT CGGTCGTCGT CGCAGGTCTT GGCCCAGGTG CTCAGGAGCT GATCACACCC
GAAGTAACCG CGGCGCTGGA CGCCGCGACC GATCTGGTCG GCTACGCGCC CTATGTCGCC
CGCGTCGCAG CGCGCAACGA TGTCCGCCGG CACGCTTCCG ACAATCGCGA GGAGATCGAT
CGCGCCTCGT TCGCGCTTCG GCTCGCGAGC GAGGGGCGGC ATGTGGTGAT CGTGTCCTCC
GGCGACCCCG GCGTATTCGC GATGGCGGCG GCGCTGTTCG AGGCGATCGA GGCCGGCGAC
CCGGCGTGGC GCGACCTCGA CATCCGCGTG CTGCCCGGCA TCAGCGCGAT GTTCGCCGCC
GCAGCGCGGA TCGGCGCGCC GCTCGGCCAT GATTTCTGCG CGATCAACCT GTCTGACAAT
CTCAAGCCGT GGGAGACCGT CGAGAAGCGG CTGCGCGCGG CGGCCGAAGC CGACTTCGTG
ATCGCGCTGT ACAATCCGAT CTCGAAAGCG CGGCAATGGC AGCTCGACCG CGCCTTCGAA
CTGTTGCGCG GCATCCATCC GGCGTCGGTG CCGGTGATCT TCGCCACCGC CGTCAGCGAG
CCTCACCAGC GCATCGACGT CGTGCCGCTC GGCGATGCGC TTCCGAGCCG TGCGGACATG
CGCACCGTGG TGATGATCGG ATCGTCGCAG ACGCGGCTCA TCCCCCGCGC CGACGGCGGC
AGCTATGTCT ATACGCCACG CTCGCTGAAG GCGCCGTCAT GA
|
|---|
| Protein sequence | MTGSVVVAGL GPGAQELITP EVTAALDAAT DLVGYAPYVA RVAARNDVRR HASDNREEID
RASFALRLAS EGRHVVIVSS GDPGVFAMAA ALFEAIEAGD PAWRDLDIRV LPGISAMFAA
AARIGAPLGH DFCAINLSDN LKPWETVEKR LRAAAEADFV IALYNPISKA RQWQLDRAFE
LLRGIHPASV PVIFATAVSE PHQRIDVVPL GDALPSRADM RTVVMIGSSQ TRLIPRADGG
SYVYTPRSLK APS
|
|---|
| |