| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3179 |
|---|
| Symbol | |
|---|
| ID | 3910980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3637119 |
|---|
| End bp | 3637847 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637885081 |
|---|
| Product | precorrin-2 C20-methyltransferase |
|---|
| Protein accession | YP_486786 |
|---|
| Protein GI | 86750290 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2243] Precorrin-2 methylase |
|---|
| TIGRFAM ID | [TIGR01467] precorrin-2 C20-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.112866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC CGACCGTCTA TGGCGTCGGC GTGGGCCCCG GCGATCCGGA CCTGATGAGC
GTCCGTGCTG CACGGCTGGT CGGCGCCGCC AAGGTCGTCG CTTACTTCAG GAAGGCCGGG
CGCGCCGGCC ACGCCCGCAC CATCGTCGAA GGCCTGCTCG CCGACGGCGT CGTCGAGGAG
CCGCTCGACT ATCCGGTGAC CACCGAAATC CCGCTCGACG ATCCCGCTTA CGCTTCGACG
CTGCGCAGCT TCTACGAGGA CTGCGTCGCG CGGCTGTCGG CGCATGTCGC GCAAGGCCGC
GACGTGGTCG TGCTGTGCGA AGGCGATCCG TTTCTCTACG GCTCGTTCAT GCACCTCTAT
CATCGGCTGC TCGGCGATGT GCCGGTGGTC GTGGTGCCCG GCATCTCCGG CATGGCGGCG
TGCTGGACGG CGAGCGGGAC GCCAATCACC TATGGCGACG ACGTGCTGTG CGTCGTGCCC
GCGACACTGA ATGCGACACG GCTCGCCGAA GCGCTGAAGA CCGGCGACGC CTTCGTCATC
ATGAAGCTCG GCCGCAATCT TCCCAAGGTC CGGCGTTCGC TCGAAGCCGC CGGGCTGCTC
GATCGCGCCG TCTATGTCGA GCGCGGCGCG ATGGCCGGCG AGACGGTGAT GCGCCTCGCC
GACAAGCCGG ACGATGCGGC GCCGTACTTC TCGATGATCC TCGTCCATGG ACAGGGACGA
CGGCCATGA
|
|---|
| Protein sequence | MTRPTVYGVG VGPGDPDLMS VRAARLVGAA KVVAYFRKAG RAGHARTIVE GLLADGVVEE
PLDYPVTTEI PLDDPAYAST LRSFYEDCVA RLSAHVAQGR DVVVLCEGDP FLYGSFMHLY
HRLLGDVPVV VVPGISGMAA CWTASGTPIT YGDDVLCVVP ATLNATRLAE ALKTGDAFVI
MKLGRNLPKV RRSLEAAGLL DRAVYVERGA MAGETVMRLA DKPDDAAPYF SMILVHGQGR
RP
|
|---|
| |