Gene RPB_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3172 
Symbol 
ID3910973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3630747 
End bp3631172 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content67% 
IMG OID637885074 
Producthypothetical protein 
Protein accessionYP_486779 
Protein GI86750283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAGT CGGCTGAGCT GAACAGCGCG ACGCTGCAGA TCTTCAATCA TCATCTCTAC 
GAGCTCTCGA AAGGGATGCG GCCGCTGGCG CTGATGACCA TGACGGCCGA GGCGGCGGCG
CCGGTGATCG CGCGGCTGCA GGGACGCGGC ATTGCGCACT ACGTCCACGA GGCGTGTCCC
GACCGGGTCA ATGTCGTGTT CGGCAGCCGG CTGGCGGTCA AGGCGGTGCA GCGCTTCCTG
GTCGGGCCGT TGTGCGAATT GTCGGCCGAG CACGATTTCA TGCTCGGCAT CCTGCTCGGC
TACGATCGCG AGATGCAGTG CGAGCGCTAT CTCGGGCGCT GCGGGGAGGG CACCGGGGCG
TCGGTCGAGC TGGCCTCGGC GCCGCCGCTG GCGCTCGCCG CGGATCAGAC CGTGCTTGTG
AGTTAG
 
Protein sequence
MGQSAELNSA TLQIFNHHLY ELSKGMRPLA LMTMTAEAAA PVIARLQGRG IAHYVHEACP 
DRVNVVFGSR LAVKAVQRFL VGPLCELSAE HDFMLGILLG YDREMQCERY LGRCGEGTGA
SVELASAPPL ALAADQTVLV S