Gene RPB_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3171 
Symbol 
ID3910972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3628856 
End bp3630658 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content64% 
IMG OID637885073 
Productflavin-containing monooxygenase FMO 
Protein accessionYP_486778 
Protein GI86750282 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA CTGCGCCGAA TGGCAAAGTC ACGACGCTGC TCGCTTTGTT GGACGATGCC 
CTGAGCGCGA ACGACCCGGA TCGCGCGCTC GAGCTGTTTC AAACCGACTG CTACTGGCGC
GACCTCGTGG CCTTCACCTG GAACATCAAG ACGATGGAAG GCAAGGACCA GGTCCGCGAC
ATGCTCGGCG CGCGGCTGAA CGACACCCGC CCGTCGAACT GGCGGATCGC CGACGGCGAG
GACGCCACCG AGGCCGACGG CGTCGTCGAG AGCTGGATCC AGTTCGACAC CGCGGTCGCG
CGCGGCTTCG GCCATCTGCG CCTGAAGGAC GGCCGGATCT GGACGCTGCT CACCACCATG
GCGGAGCTGA AGGGTTTCGA GGAGCCGCTC GGCTTCGATC GCCCGATGGG CGCCAGGCAC
GGCGTCGATC CGACGCGCAA GACTTGGAAG GAGGAGCGTG ACGCCGAGAC GGCCGAACTC
GGCATCAGCC GCCAGCCTTA TTGCGTCATC ATCGGCGGCG GCCAGGGCGG CATCGGACTC
GCCGCCCGGC TGCGCCAGCT CGGCGTGCCG ACCATCATCA TCGAAAAGAA TGAGCGCCCC
GGCGATAGCT GGCGCAAGCG CTACAAGTCG CTCTGCCTGC ACGATCCGGT CTGGTACGAC
CACCTCCCCT ATCTGCCGTT CCCGCCGAAC TGGCCGGTGT TCGCCCCGAA GGACAAGATC
GGCGACTGGC TGGAAATGTA CGCCAAGGTG ATGGAGCTGA ACTATTGGGG CTCGACGGTG
TGCAAACGCG CTTCGTATGA CGACGCGAAG CAGCAATGGA CCGTGGTGGT CGAGCGCGAC
GGCCAGGAGA TCACCCTGAC GCCGAAACAG CTGGTGCTCG CCACTGGCAT GTCGGCCAAG
CCGAACCTAC CGAGTTTCGA GGGCATGGAC CTCTTCAAGG GCGACCAGCA CCACTCCTCG
CAGCATCCCG GCCCCGATGC CTACAAGGGC AAAAAGGCGG TGGTGATCGG CTCCAACAAT
TCCGCGCACG ACATCTGCGC GGCGCTGTGG GAGGCCGGCG CCGACGTCAC CATGGTGCAG
CGCTCGTCGA CCCACGTGGT GAAGTCGGAC TCGCTGATGG AATTGGGCCT GTCCGCTCTT
TATTCCGAAC AGGCGGTGCG CAACGGCATG ACGACGGCGA AGGCCGATCT GATCTTCGCC
TCGCTGCCCT ACAAGATCCT CCACGAATTC CAGATCCCGG TCTACAACGC GATCCGCGAA
GGCGACGCCG ATTTCTACAA GCGATTGGAA GCCGCCGGCT TCATGCTCGA CTATGGCGAC
GACGAATCCG GCCTGTTCAT GAAGTATCTG CGCCGCGGCT CCGGTTACTA CATCGATGTC
GGCGCCTGCG ACCTGATCGC CGACGGCCGC ATCAAGCTGA AAAGCAATGT CGGCGTGACC
CGGCTCACTG AGCATGCGGT GATCCTCAGC GATGGCACCG AACTGCCAGC CGATGTCGTG
GTCTACGCCA CCGGCTACGG CTCGATGAAC GGCTTCGCGG CGGATCTGAT CTCGCAGGAC
ATCGCCGACA AGGTCGGCAA GGTCTGGGGG CTCGGCTCGA ACACCACCAA GGACCCGGGC
CCGTGGGAAG GCGAACAGCG CAACATGTGG AAGCCGACGC AACAAGAGGG ACTCTGGTTC
CACGGCGGCA ATCTGCACCA GTCGCGGCAC TACTCGCAAT TCCTCGCGCT GCAGCTCAAG
GCGCGAATGG AGGGCATCCC CACGCCGGTG TATGGGTTAC AGCCGGTGCA CCATTTGAAG
TGA
 
Protein sequence
MLDTAPNGKV TTLLALLDDA LSANDPDRAL ELFQTDCYWR DLVAFTWNIK TMEGKDQVRD 
MLGARLNDTR PSNWRIADGE DATEADGVVE SWIQFDTAVA RGFGHLRLKD GRIWTLLTTM
AELKGFEEPL GFDRPMGARH GVDPTRKTWK EERDAETAEL GISRQPYCVI IGGGQGGIGL
AARLRQLGVP TIIIEKNERP GDSWRKRYKS LCLHDPVWYD HLPYLPFPPN WPVFAPKDKI
GDWLEMYAKV MELNYWGSTV CKRASYDDAK QQWTVVVERD GQEITLTPKQ LVLATGMSAK
PNLPSFEGMD LFKGDQHHSS QHPGPDAYKG KKAVVIGSNN SAHDICAALW EAGADVTMVQ
RSSTHVVKSD SLMELGLSAL YSEQAVRNGM TTAKADLIFA SLPYKILHEF QIPVYNAIRE
GDADFYKRLE AAGFMLDYGD DESGLFMKYL RRGSGYYIDV GACDLIADGR IKLKSNVGVT
RLTEHAVILS DGTELPADVV VYATGYGSMN GFAADLISQD IADKVGKVWG LGSNTTKDPG
PWEGEQRNMW KPTQQEGLWF HGGNLHQSRH YSQFLALQLK ARMEGIPTPV YGLQPVHHLK