Gene RPB_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3167 
Symbol 
ID3910968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3624577 
End bp3625332 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content64% 
IMG OID637885069 
ProductABC transporter related 
Protein accessionYP_486774 
Protein GI86750278 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.449942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGATG ACATCATCCT TGAAACACAC GGGTTGACCA AGGAGTTCGC CGGCTTCTTC 
GCCGTGCGCG ACGTCAATCT ACGGGTCCGG CGCGGCCAGA TTCACGCGCT GATTGGCCCG
AACGGCGCCG GCAAGACCAC CTGCTTCAAT CTGCTGACCA AGTTCCTGCA TCCGTCGGCC
GGCCAGATCC TCTACAAGGG CCAGGACATC ACCGCGATGG CTCCGGCCGG TGTGGCGCGG
CTCGGGCTGG TGCGCTCGTT CCAGATTTCC GCGGTGTTTC CGCATCTCAC GGCGCTCGAG
AATGTCCGCG TCGCGCTGCA GCGCCAGCAC GGCAGTTCGT TCGACTTCTG GCGCTCGAAG
AGCGTGCTCG ACCGCTACAA CCACCGGGCG CGCGAATTGC TCGACGACGT CGGCCTGAGC
GAATTCTCCG ACACGCCGGC GGTCGAGATG CCCTACGGCC GCAAGCGCGC GCTGGAGATC
GCCACCACGC TGGCGCTCGA TCCGGAAATG ATGCTGCTCG ACGAGCCGAT GGCCGGCATG
GGCCACGAGG ACATCGACAA GATCGCCGCG CTGATCAAGC GGATCTCGGC GAAGTACACC
ATTCTGATGG TCGAGCACAA TCTCAGCGTC GTCGCCAATC TGTCCGATGT CATCACCGTG
CTGACCCGCG GGCAGGTGCT GGCCGAGGGC CACTACAAAG ACCTGACCCA GGACGAGCGG
GTCAAGGAAG CCTATCTCGG AGCGGGTCAT GGCTGA
 
Protein sequence
MADDIILETH GLTKEFAGFF AVRDVNLRVR RGQIHALIGP NGAGKTTCFN LLTKFLHPSA 
GQILYKGQDI TAMAPAGVAR LGLVRSFQIS AVFPHLTALE NVRVALQRQH GSSFDFWRSK
SVLDRYNHRA RELLDDVGLS EFSDTPAVEM PYGRKRALEI ATTLALDPEM MLLDEPMAGM
GHEDIDKIAA LIKRISAKYT ILMVEHNLSV VANLSDVITV LTRGQVLAEG HYKDLTQDER
VKEAYLGAGH G