Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3167 |
Symbol | |
ID | 3910968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3624577 |
End bp | 3625332 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637885069 |
Product | ABC transporter related |
Protein accession | YP_486774 |
Protein GI | 86750278 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.449942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTGATG ACATCATCCT TGAAACACAC GGGTTGACCA AGGAGTTCGC CGGCTTCTTC GCCGTGCGCG ACGTCAATCT ACGGGTCCGG CGCGGCCAGA TTCACGCGCT GATTGGCCCG AACGGCGCCG GCAAGACCAC CTGCTTCAAT CTGCTGACCA AGTTCCTGCA TCCGTCGGCC GGCCAGATCC TCTACAAGGG CCAGGACATC ACCGCGATGG CTCCGGCCGG TGTGGCGCGG CTCGGGCTGG TGCGCTCGTT CCAGATTTCC GCGGTGTTTC CGCATCTCAC GGCGCTCGAG AATGTCCGCG TCGCGCTGCA GCGCCAGCAC GGCAGTTCGT TCGACTTCTG GCGCTCGAAG AGCGTGCTCG ACCGCTACAA CCACCGGGCG CGCGAATTGC TCGACGACGT CGGCCTGAGC GAATTCTCCG ACACGCCGGC GGTCGAGATG CCCTACGGCC GCAAGCGCGC GCTGGAGATC GCCACCACGC TGGCGCTCGA TCCGGAAATG ATGCTGCTCG ACGAGCCGAT GGCCGGCATG GGCCACGAGG ACATCGACAA GATCGCCGCG CTGATCAAGC GGATCTCGGC GAAGTACACC ATTCTGATGG TCGAGCACAA TCTCAGCGTC GTCGCCAATC TGTCCGATGT CATCACCGTG CTGACCCGCG GGCAGGTGCT GGCCGAGGGC CACTACAAAG ACCTGACCCA GGACGAGCGG GTCAAGGAAG CCTATCTCGG AGCGGGTCAT GGCTGA
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Protein sequence | MADDIILETH GLTKEFAGFF AVRDVNLRVR RGQIHALIGP NGAGKTTCFN LLTKFLHPSA GQILYKGQDI TAMAPAGVAR LGLVRSFQIS AVFPHLTALE NVRVALQRQH GSSFDFWRSK SVLDRYNHRA RELLDDVGLS EFSDTPAVEM PYGRKRALEI ATTLALDPEM MLLDEPMAGM GHEDIDKIAA LIKRISAKYT ILMVEHNLSV VANLSDVITV LTRGQVLAEG HYKDLTQDER VKEAYLGAGH G
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