| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3165 |
|---|
| Symbol | |
|---|
| ID | 3910966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3622922 |
|---|
| End bp | 3623797 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637885067 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_486772 |
|---|
| Protein GI | 86750276 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCA ATATCCAGGC CCTGTTGGCG CAGCTTCTGG TCGGGCTGAT CAACGGCTCG
TTCTACGCCT TGCTCAGTCT CGGCCTCGCC GTCATCTTCG GGATGCTCAA CATCATCAAC
TTCGCCCATG GCGCGCTGTA CATGATGGGC GCGTTCTGCG CCTATTTCCT GCTGAATCTG
TTCGGCATCG GCTATTGGTG GGCGCTGATC CTGGCGCCGC TGATCGTCGG CGCGTTCGGG
ATGCTGATGG AGCGCACGCT GCTGCAATGG CTGTCCGGGC TCGACCATCT CTACGGCCTG
CTCCTGACCT TCGGCGTCGC GCTGATCATC CAGGGGCTGT TCCAGAATTA TTTCGGCTCC
TCCGGTCTGC CCTACGCCAT CCCCGACGAA CTCAGGGGAG GCGTCAATCT CGGATTCATG
TATCTGCCGA TCTATCGCGG CTGGGTGGTG GCGTTCTCGC TGGTGGTGTG CCTGCTCACC
TGGTACCTGA TCGAGCGGAC CCGGCTCGGC GCCAATCTGC GCGCCGCCAC GGAAAATCCG
ACGCTGGTGC GCGCGTTCGG CATCAACGTG CCGCGGATGA TCACGCTGAC CTACGGGCTC
GGCGTCGGCC TCGCCGCGCT CGCCGGCGTG CTGTCGGCGC CGATCAACCA GGTCCGGCCG
CTGATGGGCG CCGATCTGAT CATCGTGGTG TTCGCGGTGG TGGTGATCGG CGGCATGGGC
TCGATCATGG GCTCGATCAT CACCGGCTTC GCGCTCGGGG TGATCGAGGG CCTGACCAAA
TATTTCTACC CCGAGGCCTC CAACACCGTG GTGTTCGTAC TGATGGTGCT GGTGCTCTTG
GTCAAACCCT CGGGACTGAC GGGACGGGCG ACCTGA
|
|---|
| Protein sequence | MSINIQALLA QLLVGLINGS FYALLSLGLA VIFGMLNIIN FAHGALYMMG AFCAYFLLNL
FGIGYWWALI LAPLIVGAFG MLMERTLLQW LSGLDHLYGL LLTFGVALII QGLFQNYFGS
SGLPYAIPDE LRGGVNLGFM YLPIYRGWVV AFSLVVCLLT WYLIERTRLG ANLRAATENP
TLVRAFGINV PRMITLTYGL GVGLAALAGV LSAPINQVRP LMGADLIIVV FAVVVIGGMG
SIMGSIITGF ALGVIEGLTK YFYPEASNTV VFVLMVLVLL VKPSGLTGRA T
|
|---|
| |