Gene RPB_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3162 
Symbol 
ID3910963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3618048 
End bp3618692 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content62% 
IMG OID637885064 
Producthypothetical protein 
Protein accessionYP_486769 
Protein GI86750273 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGCT ACTTTCGAGC CCTTCTGCCG AGGGAGGAAC GGTTTTTCGA CCTGTTCGAC 
CGCCACGCCC AGACGGTCGT CAAGGGGGGC CTGGCGTTGC AGGACATGCT GCGAGGCGGC
GACGAGACGC TGGTGCATTG CCAACGCGTC AGCCATTTCG AGGCCGAGGC CGACGGCATC
ACCCGCGAGG TCCTGACCGC GGTGCGCCGC ACCTTCATCA CCCCGTTCGA CCGCGTCGAC
ATCAAGAACC TGATCACCTC GATGGATGAC GCCATCGACC AGATGCAGCA GACCGCCAAG
GCGGTGATCC TGTTCGAGGT CCGCGAATTC GAGCCGCCGA TGCGCGAGAT CGGGACGCTG
CTGGTCGAAA GCGCCAATCT GGTCGGCAAG GCGTTGCCGC TGATGAAATC GATCGGCCGG
AATCTGCAGA TGCTGACGGC GATGACCGAG GAGATCACCA AGCTCGAGGG TCGCGTCGAC
GATCTGCACG ACATCGGCCT GAAGGAGCTG TTCCTCAAGC ACCGCGACGC CAACGCCATG
GACTTCATCG TCGGCGCCGA AATCTACGAC CATCTCGAGA AGGTCGCCGA TCGGTTCGAC
GACGTCGCCA ACGAGATCAA CAGCATCGTC ATCGAGCAAG TCTAG
 
Protein sequence
MLRYFRALLP REERFFDLFD RHAQTVVKGG LALQDMLRGG DETLVHCQRV SHFEAEADGI 
TREVLTAVRR TFITPFDRVD IKNLITSMDD AIDQMQQTAK AVILFEVREF EPPMREIGTL
LVESANLVGK ALPLMKSIGR NLQMLTAMTE EITKLEGRVD DLHDIGLKEL FLKHRDANAM
DFIVGAEIYD HLEKVADRFD DVANEINSIV IEQV