Gene RPB_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3160 
Symbol 
ID3910961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3616689 
End bp3617003 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content67% 
IMG OID637885062 
Productsmall multidrug resistance protein 
Protein accessionYP_486767 
Protein GI86750271 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATGGG GGTTACTGGT CGTCGCCGGG TTGATGGAAG TGGGCTGGGC GATCGGCCTG 
AAATACACCG AAGGTTTCAC CCGCCTGGTG CCTTCGGTGC TGACCATCGC CGCGATGATC
GTCAGCATCG CCCTGCTCGG TCTGGCGCTG AAGACGCTGC CGATCGGCAC CGCCTACGCG
GTCTGGACCG GAATCGGCGC GGTCGGCACC GCGGCGCTCG GCATCGTGCT GTTCGGCGAT
CCGGCGACGG TGGCCCGCCT CGCCTGCATC GGCCTGATCG TCGCCGGCAT CATCGGGCTG
AAGGTGGTGA CCTGA
 
Protein sequence
MAWGLLVVAG LMEVGWAIGL KYTEGFTRLV PSVLTIAAMI VSIALLGLAL KTLPIGTAYA 
VWTGIGAVGT AALGIVLFGD PATVARLACI GLIVAGIIGL KVVT