Gene RPB_3155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3155 
Symbol 
ID3910956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3610212 
End bp3611942 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content67% 
IMG OID637885057 
Producthypothetical protein 
Protein accessionYP_486762 
Protein GI86750266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGGC ATTCGGGACG ACGGATCGGG CAGGGGATGG CGGCGGCGCT GGCCGCGGCG 
CTGCTCTCCG GCAGCGCGCT TGCGCGGGAG GTCGGCAAGG CGTCGGCGGT CAATCCGAAC
GCCACCGCCA ACATGCGCAC CATCACCATC GGCGCGTCGA TCACCCACAA GGAACGGATC
CAGACCACCT CGGCCGGCTC GGTGCAGCTG TTGTTCATCG ACAAGACGTC GATGACGATC
GGCCCGAACA GCGATCTGAC CATCGACGAA TACGTCTATG ACCCGAATGC CGGCAGCGGC
AAGCTGGCAG CGACGCTCGG CAAGGGCGCG CTGCGCTTCG TCGGCGGCCA GATCAGCCAC
ACCGGCGACG CCGAGATCAA GACCGCCTCG GCGACCGTCG GCATCCGCGG CGGTGTGGCG
CTGATCGGCA CCAACCACGT CTATGCCGGC TACGGCACCT CGACGGTCCG CTCCGGCGGA
TCGAGCGTGA CGCTCGGGGC CGGCGAATAC ACCTCGATGC AGGGCGGCCA GCCGCCGTCG
CCGCCTGGCC CGCCGCCGCC GAATTTCGTG CTGAGCCAGA TCCAGATGTT CCAGAGCGGC
AGTGGTCAGT CCGGCGGCGT CGCGCGCGGC GCGGCCTCGC CGGGCAACGT TCAGCGCGCC
TCCAACCGCG CCACCGGCAC GCAGGGTGGG TCCGTCGTCG GCTCTCTGAC ACCAGCGCCG
CCGCCGCCGG CGACTCCGCC GATCAACCAG GTCGCGTCGA CGCTGAACCA GACGATCCAG
ACCTCGACCC AAGAGGCGGC GGTGAGGCAG ACCGAACGGG ACTACGCCGG CGCGCGCCCC
ACACTGACGC TGTCCGGCTT CCTCGGTGGC CTGATGCACA GCGTGCTGAC CAGCTACAGC
AGCTATTCCA CGTCGGGCTC GACCGGCATC GCGACCGGCG AAGCGACCAT CGCGCTCGAT
GGCAACGGCA ACCGGTTGCA CGCGCAATTC TCCGGCGAGG TGACGCCCGG TCCGAACACG
GCGTATCTGC CGACGACGTT CAACTATCAG TACGGTTCGG TCGGCGCCAA TTCCGACGAG
CAGAGCGCCT ATGGCGATTA CAGCAATTTC GGCGCCGGGC CGGCACGAGA CGCCAACGGT
CAACCGATAT CGACGATCAA CAATGCGCCG ATCATCAATC AGACCGGCGC GATGATCACG
GTGAACCGCG AGCAGGCGCG GCAAATCGCG CCCAATTACG GCTCCGCGAC CGTCACGATC
TGCGACTGCG ACTACACCAG GTGGGGTCTC TGGACGAGCC AGAGCACGCA GTATTCCTAT
TACGACTCGT TGGTGGGATT CTGGGTCGCC GGCCGGCCGA CCACGGCCGG GGAGGTTCCG
CTGACCGGTC AGGCGACCTA TGCGGGCCAT GTGGTCGCGG CGATCGAAAA CCAGAGCGCC
ACCTATATCG CCACCGGCAA TTTCCAGAAC ACGGTGAACT TCGGCAACCG TACCGGCGCG
GTCACCGTCA CCGGGCTCGA CAGCACCAAC TACGCCGGCC AGGTGCAGTT CATGCAGGAT
CCGCGCTACT TCGCCGGTTC GCTCGCCGGA GACGCCGGCG CGCGGCAGAT GGCGCTGACC
GGAAGCTTCT TCCGCGGCGT GTCGAGTCCG GTCGGCGAAA TGGGCGGCAG CGTGGCCATC
ACCGGCACCA ACTATCTCGG CGGCGGCATC TTCGCCGCGC AAATGAAATA A
 
Protein sequence
MRRHSGRRIG QGMAAALAAA LLSGSALARE VGKASAVNPN ATANMRTITI GASITHKERI 
QTTSAGSVQL LFIDKTSMTI GPNSDLTIDE YVYDPNAGSG KLAATLGKGA LRFVGGQISH
TGDAEIKTAS ATVGIRGGVA LIGTNHVYAG YGTSTVRSGG SSVTLGAGEY TSMQGGQPPS
PPGPPPPNFV LSQIQMFQSG SGQSGGVARG AASPGNVQRA SNRATGTQGG SVVGSLTPAP
PPPATPPINQ VASTLNQTIQ TSTQEAAVRQ TERDYAGARP TLTLSGFLGG LMHSVLTSYS
SYSTSGSTGI ATGEATIALD GNGNRLHAQF SGEVTPGPNT AYLPTTFNYQ YGSVGANSDE
QSAYGDYSNF GAGPARDANG QPISTINNAP IINQTGAMIT VNREQARQIA PNYGSATVTI
CDCDYTRWGL WTSQSTQYSY YDSLVGFWVA GRPTTAGEVP LTGQATYAGH VVAAIENQSA
TYIATGNFQN TVNFGNRTGA VTVTGLDSTN YAGQVQFMQD PRYFAGSLAG DAGARQMALT
GSFFRGVSSP VGEMGGSVAI TGTNYLGGGI FAAQMK