Gene RPB_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3153 
Symbol 
ID3910954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3607257 
End bp3609536 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content69% 
IMG OID637885055 
Productadenylate/guanylate cyclase 
Protein accessionYP_486760 
Protein GI86750264 
COG category[T] Signal transduction mechanisms 
COG ID[COG4252] Predicted transmembrane sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGGC TGAGCCGCGA TGCGCATCCG TTTCTGACCC GCGCCGCGCC GGTCTGGGTC 
CGGTTGCGAC GGCTGACGCG TAGCAAGTCG GCGCGCGCGG TTGCAGCGGC GCTGCTGACG
CTGATCGCGC TGACGGCGCT GCGCACTTAC GATCCGCGGC TGGTCCATGA AACCAAGGAA
CGCGCCTTCG ACGCGTATCA GCGATTGTCA CCGCGGCCGC ACGCCGATCT TCCGGTGCGG
ATCGTCGATA TCGACGAGGC GTCGCTCGCC GCCTATGGGC AGTGGCCGTG GCCGCGCACC
CGGCTGGCGG CGCTGACCAA ACGGCTGGGT GAACTCGGCG TCGGCGTCGT GGCCTACGAC
ATCATCTTCT CGGAGCCCGA CCGCACCACG CCGGGCCGCC TCGCCAGCGA ACTCGGCGAT
GCCGATCTGC CGGATCGCGA TCTCACCGTC GCGCTGCTGA AGAGCCTGCC GGATCACGAT
CAGAGCTTGG CGCAGGCGAT GCAGAAGACG CCGACCGTGC TCGGTTTCGC CGCCATCCAG
CGTGCCAACG CGACACGGCC GTCGGTGAAA GCGGGGCTCG CCGTCGTCGG CGTCCAACCC
GCCTTCGTGC TGCCGCCGTT CCGCGGCGCC GTCTCCAATC TGCCGGTGCT CGACGAGGCT
GCGGCGGGAA TCGGCGCGAT CAATCTGTCG GCGCGCGACC GATCCGGCGT GGTTCGCCGG
CTGCCGATGC TGATGTCGGA CGGCGCGCGG GTGTATCCGA GCCTGGCGAT CGAGGCGCTG
CGCGTCGCGC AGAACCAGAA GGGCATCGTG GTGCGCGGCA CCGGCGCCAG CGGCGAGGCC
GACACCGGGC ACGCCGCGCT GCTGGATATG CGGGTCGGCC AGTTCAAGCT GCCGCTGACG
CCCGACGGCG AGGCCTGGCT GTATTTCAAC CGCGACCGCC GGGATCGATA CGTTTCGGTG
AAGGACGTGC TCGACCCGGC CAAGGACGCC GAGATGCGCG ACAAGCTGGA GGGCATGATC
GCGCTGGTCG GCACCTCCGC CGCGGGGCTG CTCGATGCCC GCGCCACGCC GCTCGGCCAG
GTGATGCCGG GCGTCGCGAT CCAGGCCCAG ATGATCGAGC AGATCATCGC TCAGGACTTC
ATCGAGCGGC CGGACTGGGC CGACGGCTTC GAGATCGTGC TGACGCTGCT GCTGGGCTCG
CTGGTCGCGG CGCTGCTGCT GGTCGCCGGC GCCCGGTTCT CGCTGATCGC CTGCGGCGTG
GTGTTTCTCG GCGCGATCGG CGGATCGTGG ATCGCGTTCT CGCATTTCCG CCTGCTGATC
GACCCGGTGT ATCCATCGCT GGCGACGCTG CTGACCTATG TCGCCGTCGA GCGCGTGCTG
CACATGGCCT CCGACCGCGA GAAGAGATTC GCGCGCCAGG CGTTCGGCCA GTATCTCGCG
CCGGAATTGC TGGCGAAGCT CGAGCAGTCG CCCGACGGAA TGCGGCTCGG CGGCGAGACC
CGCGATCTCA GCGTGATGTT CATGGACGTG CGCGGTTTCA CCCCGATCTC GGAGACGCTG
AGCGCGACCG AATTGGTGGA TTTCATCAAC ACGCTGCTGT CGCCGCTGTC CGACGCGATC
CAGGACGAAC TCGGCACGAT CGACAAATAC ATCGGCGACT CGATCATGGC GTTCTGGAAC
GCCCCGGTCG ACGTGCCGGA TCACGCCGCG CGCGCCTGTC GCGCCGCGCT GAAGATGCGC
GCGGTGGTCG AGCAGCTCAA CGACGCCGAC GCCTTCGGCT TCGCGGCGCG CGGCATTGAC
GATCCGGTGG TGCGGATCGG TGTCGGCATC AACACCGGCG CGGCCTGCGT CGGCAACATG
GGCTCGGCCA AGCGCTTCAA CTACTCGGCG ATGGGCGATG TGGTGAACGT CGCGGCCCGG
ATCGAGAGCG CGTCGAAGAG CTTCGGCACC GATTTGCTGG TGTCCGAAGA CGTCGCCCGC
GCCGCGCCGC GAATTGCGCT GCTCGAGGCC GGCGAGATCA TGCTGAAGGG CAAGTCGAAG
CCGACCCGGC TCTTCGCGCT TGCGGGCGAC GAGGAGGCCG CGGCGACGCC GGAGTTCGCC
GAGTTGCAGC GGTGCCATCG CGCGCTGTTG GACGCGCTAG CGGCCGACGA TGCGCGGGCC
GCAGCCGAGG CCCTGGCGAA CTGCCGGACT GCTGCGCCGC CGGCACTCGC CGGACTGTAC
GATCATTTCG CCGAGCGGGT GGGAGCGATC GGCGGGATGC AGAAGCAGGG CGTCGGATAG
 
Protein sequence
MRRLSRDAHP FLTRAAPVWV RLRRLTRSKS ARAVAAALLT LIALTALRTY DPRLVHETKE 
RAFDAYQRLS PRPHADLPVR IVDIDEASLA AYGQWPWPRT RLAALTKRLG ELGVGVVAYD
IIFSEPDRTT PGRLASELGD ADLPDRDLTV ALLKSLPDHD QSLAQAMQKT PTVLGFAAIQ
RANATRPSVK AGLAVVGVQP AFVLPPFRGA VSNLPVLDEA AAGIGAINLS ARDRSGVVRR
LPMLMSDGAR VYPSLAIEAL RVAQNQKGIV VRGTGASGEA DTGHAALLDM RVGQFKLPLT
PDGEAWLYFN RDRRDRYVSV KDVLDPAKDA EMRDKLEGMI ALVGTSAAGL LDARATPLGQ
VMPGVAIQAQ MIEQIIAQDF IERPDWADGF EIVLTLLLGS LVAALLLVAG ARFSLIACGV
VFLGAIGGSW IAFSHFRLLI DPVYPSLATL LTYVAVERVL HMASDREKRF ARQAFGQYLA
PELLAKLEQS PDGMRLGGET RDLSVMFMDV RGFTPISETL SATELVDFIN TLLSPLSDAI
QDELGTIDKY IGDSIMAFWN APVDVPDHAA RACRAALKMR AVVEQLNDAD AFGFAARGID
DPVVRIGVGI NTGAACVGNM GSAKRFNYSA MGDVVNVAAR IESASKSFGT DLLVSEDVAR
AAPRIALLEA GEIMLKGKSK PTRLFALAGD EEAAATPEFA ELQRCHRALL DALAADDARA
AAEALANCRT AAPPALAGLY DHFAERVGAI GGMQKQGVG