| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3146 |
|---|
| Symbol | |
|---|
| ID | 3910947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3599357 |
|---|
| End bp | 3599902 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637885048 |
|---|
| Product | NosL |
|---|
| Protein accession | YP_486753 |
|---|
| Protein GI | 86750257 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4314] Predicted lipoprotein involved in nitrous oxide reduction |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGC GTGTATCGGC GGCGCTGGTC GCCCTCGTGC TACTCACCGG ATGCGAGCCG
AAAGCAGGCG CCCCGGCGCC GCTGCCGATC GCGCTGAATG CCGATGCGAT GGGCGTGTTC
TGCGGGATGA ATCTGATGGA GCATCCCGGG CCCAAGGGCC AGATCATCAC CGCGAGCCGG
ATCGATCCGT TCTGGTTCTC CTCGGTGCGC GACACCGTGG CCTTCACGCT GATGCCGGAT
CAACCGCGCG ACATCCGCGC GATCTATGTC TCCGACATGG CCCGCGCGCC GAGCTGGGAG
CAACCGGGCG AGACCAACTG GATCGACGCC CGCGAGGCGT TCTTCGTGAT CGGCAGCCGC
AGGCAGGGCG GCATGGGCGC TGCCGAAGCG GTGCCGTTCG GTGAACGCAC GGCGGCGGAA
GGGTTCGCCG CCGCCAACGG CGGACAGGTC GTAATGCTCG ACCAGATTCC CGGCGACTAC
GTCCTCGGCA GCGAGCCATC CGGCACCGCA GGTACCCCGG ACGATTCCGG CGTGCGCACC
AACTAA
|
|---|
| Protein sequence | MKLRVSAALV ALVLLTGCEP KAGAPAPLPI ALNADAMGVF CGMNLMEHPG PKGQIITASR
IDPFWFSSVR DTVAFTLMPD QPRDIRAIYV SDMARAPSWE QPGETNWIDA REAFFVIGSR
RQGGMGAAEA VPFGERTAAE GFAAANGGQV VMLDQIPGDY VLGSEPSGTA GTPDDSGVRT
N
|
|---|
| |