Gene RPB_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3127 
Symbol 
ID3910928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3573289 
End bp3574269 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content65% 
IMG OID637885029 
Productputative FecR 
Protein accessionYP_486734 
Protein GI86750238 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.892412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.506953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT CGGACGATCA GAACATGGCA GCCGATACGC GGGAGGATCA AGCCTTCGAG 
CGGCTGACGC GTTTGACCTC CGGCGAGGTC ACCACGGGCG AATTGCAGGC CTTGGCGCTT
TGGCGCGCGC AGAGTCCGGA GAACGAGGCG GCTTTCGTGG AAGCCGGCAA GCTGTGGCAT
TCCGTCAAGC CGGCCGTCGA GAGAGTTGCG CGCCAACGCC GCGGCATGGC CGCGCCGACG
TCCGGAATGC CCATGCGGAT GGGGCGTCGA GCCATGCTCG GCGGCGCGCT GGCCGCGAGT
GCGGCCTATC TGGTCGTGCG GCCACCGCTC GGCCTGTGGT CGTCGCTGTC CGAACTGACA
TCCGACTATA GGACAGTGAC TGGCCAGCAG CGGCGGGTCA CGACCGAGGG GGGAGCTACG
ATCGAGCTCA ACACCCGAAC AAGCGTCGAC ATACGGCTGG CCGGCGACAC CGAGCGGATC
GAGCTGATAG CCGGCGAAGC TGCGATCACG ACGGCGGTGC GTGCGGCTCG ATCGATCGTG
GCGCTGGCGG GCGACGGACA GGCAACCGCG ACGGATGCGA TGTTCAATAT GCGCCGCGAT
GGGCCTTCAG TCTGCATCAC ATGCGTGAGT GGGACAGTCC TGGTCGAGCA GCGCGGAGTG
CCTGTTACGT TGCGGCAAAA GCAGCAGGTG TCCTACACGG ATGCGGGCTT GGGTCCGTTG
GTCGAGATCG ATCCGGCCGG CGTGACGGCC TGGCAGCAAG GCATCCTCGC CTTTCATGAC
GAACCGCTCG GCCGGGTCGT CGATGAAGTC AATCGCTACT GGCCCGGCAA GATCATCGTG
GCGAACGCCA GCCTCGCGAA ACGTCCGGTC ACGGCGCGCT TCAAGCTCGA CCGGCTGGAG
GATGCCATCA CCCAGATTCA GCTGGTGTTT CACGCCAGTG TCACAAGGCT GCCGGGAGGT
GTCGTGATCT TGAGCTCTTG A
 
Protein sequence
MTESDDQNMA ADTREDQAFE RLTRLTSGEV TTGELQALAL WRAQSPENEA AFVEAGKLWH 
SVKPAVERVA RQRRGMAAPT SGMPMRMGRR AMLGGALAAS AAYLVVRPPL GLWSSLSELT
SDYRTVTGQQ RRVTTEGGAT IELNTRTSVD IRLAGDTERI ELIAGEAAIT TAVRAARSIV
ALAGDGQATA TDAMFNMRRD GPSVCITCVS GTVLVEQRGV PVTLRQKQQV SYTDAGLGPL
VEIDPAGVTA WQQGILAFHD EPLGRVVDEV NRYWPGKIIV ANASLAKRPV TARFKLDRLE
DAITQIQLVF HASVTRLPGG VVILSS