Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3127 |
Symbol | |
ID | 3910928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3573289 |
End bp | 3574269 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637885029 |
Product | putative FecR |
Protein accession | YP_486734 |
Protein GI | 86750238 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.892412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.506953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGT CGGACGATCA GAACATGGCA GCCGATACGC GGGAGGATCA AGCCTTCGAG CGGCTGACGC GTTTGACCTC CGGCGAGGTC ACCACGGGCG AATTGCAGGC CTTGGCGCTT TGGCGCGCGC AGAGTCCGGA GAACGAGGCG GCTTTCGTGG AAGCCGGCAA GCTGTGGCAT TCCGTCAAGC CGGCCGTCGA GAGAGTTGCG CGCCAACGCC GCGGCATGGC CGCGCCGACG TCCGGAATGC CCATGCGGAT GGGGCGTCGA GCCATGCTCG GCGGCGCGCT GGCCGCGAGT GCGGCCTATC TGGTCGTGCG GCCACCGCTC GGCCTGTGGT CGTCGCTGTC CGAACTGACA TCCGACTATA GGACAGTGAC TGGCCAGCAG CGGCGGGTCA CGACCGAGGG GGGAGCTACG ATCGAGCTCA ACACCCGAAC AAGCGTCGAC ATACGGCTGG CCGGCGACAC CGAGCGGATC GAGCTGATAG CCGGCGAAGC TGCGATCACG ACGGCGGTGC GTGCGGCTCG ATCGATCGTG GCGCTGGCGG GCGACGGACA GGCAACCGCG ACGGATGCGA TGTTCAATAT GCGCCGCGAT GGGCCTTCAG TCTGCATCAC ATGCGTGAGT GGGACAGTCC TGGTCGAGCA GCGCGGAGTG CCTGTTACGT TGCGGCAAAA GCAGCAGGTG TCCTACACGG ATGCGGGCTT GGGTCCGTTG GTCGAGATCG ATCCGGCCGG CGTGACGGCC TGGCAGCAAG GCATCCTCGC CTTTCATGAC GAACCGCTCG GCCGGGTCGT CGATGAAGTC AATCGCTACT GGCCCGGCAA GATCATCGTG GCGAACGCCA GCCTCGCGAA ACGTCCGGTC ACGGCGCGCT TCAAGCTCGA CCGGCTGGAG GATGCCATCA CCCAGATTCA GCTGGTGTTT CACGCCAGTG TCACAAGGCT GCCGGGAGGT GTCGTGATCT TGAGCTCTTG A
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Protein sequence | MTESDDQNMA ADTREDQAFE RLTRLTSGEV TTGELQALAL WRAQSPENEA AFVEAGKLWH SVKPAVERVA RQRRGMAAPT SGMPMRMGRR AMLGGALAAS AAYLVVRPPL GLWSSLSELT SDYRTVTGQQ RRVTTEGGAT IELNTRTSVD IRLAGDTERI ELIAGEAAIT TAVRAARSIV ALAGDGQATA TDAMFNMRRD GPSVCITCVS GTVLVEQRGV PVTLRQKQQV SYTDAGLGPL VEIDPAGVTA WQQGILAFHD EPLGRVVDEV NRYWPGKIIV ANASLAKRPV TARFKLDRLE DAITQIQLVF HASVTRLPGG VVILSS
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