Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3125 |
Symbol | |
ID | 3910926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3558855 |
End bp | 3559949 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637885027 |
Product | Phage integrase |
Protein accession | YP_486732 |
Protein GI | 86750236 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCT TGATCAAGCG CGGAAGAAAT TGGACTGCCA CGGCGCGCCT GCCGGATACT TTTCAGGGGC CGGCAGCCTC GAAATCGATC AGCAAAACGT TCCAAAAGAA AGATGCCGCA AAGCTCTGGC TGAGTTCGAC AGAGACGGCC ATGAAGCTTG GCAACTGGCG TGATCCTCGG CTCGAACTCA AGGCCTATGG ACCGCTGGGG TGGCCTGAGA AGCGCTTTGC GGAGGCGCTG GATGACTACC GGATCAAGGT GACGCCCGAA AAGAAGGGTG CATCTCAGGA AGTTGCAATG CTTCAGATGT TGGCCCGGGA GGAATTCGCC CAAAAGCGCA TCCGGGATCT GATGGTTTCC GACTTTGCTG ACTTCCGCGA TGCGCGCGAC AAGGCAGGGA AGTCAGCGTC AACGATCAGG AACAACCTCA ACACGATTTC GGCCGTCTAC GAATGGCTGA TTCACGAAAA GGCCGTCGAC ATCGCCAATC CGATCGCTTC GCTTCGGAAG CGCCGACGCG GCGTGCCGCA GCCCACGGGG CACCGTGAAC GGCGGCTCCT GGACGGGGAG GAAGAGGCCA TTGCGCAGGC AATTGAAGAG CTTCCCGTTG ATCCGACGCG TCGGCAATGG CGCGCCCTTT TCCCACTTCT CCTCGACACC GGAATGCGGC TTGGAGAGGC AATCTCTATC GAATGCGCAT GGATTCGTCG GGATTATGGA TTTGTTTTCA TTCCTGACTC AAAGAACGGC AGCGTGCGGC ACGTCGCGCT GTCGGACCGC GCTTACGCCG GTTTGCTCGA GCTGACAGAC GGAGAGCCCG CCGACAGCAA GGTCTTCCGG TTCACGCCGT GGGTCGCCAA AGATGCCTGG CGGAATGAGA TCAGGGTCAG GGCAGGGTGT CAGGACTTGA GAATTCACGA TCTCCGGCAT GAAGCGTTGT CGAGGATGGC AGCGAGGGGA GCTGAGCTGA AAACACTGAT GCGGCAAAGC GGCCACAAGA CGGTGGCAGT GCTCATGAGG TATTTGAATC CGACGCCTGC TGAGCAGAGG GCGCGGTTGT TTCCGGCCAA ACAGAATGTC GAACTGGGAC AATGA
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Protein sequence | MSTLIKRGRN WTATARLPDT FQGPAASKSI SKTFQKKDAA KLWLSSTETA MKLGNWRDPR LELKAYGPLG WPEKRFAEAL DDYRIKVTPE KKGASQEVAM LQMLAREEFA QKRIRDLMVS DFADFRDARD KAGKSASTIR NNLNTISAVY EWLIHEKAVD IANPIASLRK RRRGVPQPTG HRERRLLDGE EEAIAQAIEE LPVDPTRRQW RALFPLLLDT GMRLGEAISI ECAWIRRDYG FVFIPDSKNG SVRHVALSDR AYAGLLELTD GEPADSKVFR FTPWVAKDAW RNEIRVRAGC QDLRIHDLRH EALSRMAARG AELKTLMRQS GHKTVAVLMR YLNPTPAEQR ARLFPAKQNV ELGQ
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