Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3116 |
Symbol | |
ID | 3910917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3550901 |
End bp | 3551575 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637885020 |
Product | isochorismatase hydrolase |
Protein accession | YP_486725 |
Protein GI | 86750229 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGTCGT CCACAGCGCT TCTTCGCAAT CTCGCCGACA AGACCGATCC GCGGCATGCG GCGCTGCTGG TGATCGACGT GCAGAACCAT TTCGCCGCGC CCGGCGGTTT CTTCGACCGG ATCGGCGCCG ACCTCGGCGT CGTGCAGCGG GAGCGGGTCC CCAATCTGTT GCGGCTGATC TACGCCGCGC GCCGGGCCGG CGTTCTGGTG ATCTTCGTCC AGGCGATCTA CGATCCCGAG CATCTGTCGG ATGCGATGCG CGAACGCAAC GCGCGGATCG GCAGCGAGTT GCCGCGCTGC CGCAGCGGCA CATGGGGCGC CGAGTTCTAC CGCGTCGCAC CGGAGCCGGG CGAGCCGGTC GTGATCAAGC ATCGCTACAG CGCGATGGTC GGGCCGCAAT TGCCCGAGCT GTTGCGCGAT CGCGGCATCC GGAGCCTGCT GCTCACGGGC ATCGCGACCG ACACGTGTGT CGAATCCGCC GGGCGCGACG CGTATTTCCG CGACTACTAC GTGACGCTGG TCGGCGATTG CTGCGGCGCC GCCAGCGACG AGGATCATCG CGGTGCGCTG AAGCGGTTCC ATCGCGACTA CGGAGCGGTG GTCGATGCCG ACGACGTGAT CGCCACCTGG CAAGGCGTCG GGGCGACCGC TGCCGTGGCG AATTCGGCCT TATGA
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Protein sequence | MPSSTALLRN LADKTDPRHA ALLVIDVQNH FAAPGGFFDR IGADLGVVQR ERVPNLLRLI YAARRAGVLV IFVQAIYDPE HLSDAMRERN ARIGSELPRC RSGTWGAEFY RVAPEPGEPV VIKHRYSAMV GPQLPELLRD RGIRSLLLTG IATDTCVESA GRDAYFRDYY VTLVGDCCGA ASDEDHRGAL KRFHRDYGAV VDADDVIATW QGVGATAAVA NSAL
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