Gene RPB_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3108 
Symbol 
ID3910909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3541629 
End bp3542402 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID637885012 
Productaspartate dehydrogenase 
Protein accessionYP_486717 
Protein GI86750221 
COG category[R] General function prediction only 
COG ID[COG1712] Predicted dinucleotide-utilizing enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.848783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGATCG CCGTGATCGG CTACGGAGCC ATCGGAAGGT TCTTGATCGA GCAGCTCGAT 
GCCGTTCCGG ATTTCGAGAT CGCAGCGGTC TATTCCGTGC CGGCGCCACC CGATCGCGCC
GAGCGCGTGG TCGACGATCT CGACGCGCTG CTTGCGACCC GGCCCGACCT GGTGGTCGAA
TGCGCCGGCC ATCGCGCCCT GTCGGAATGC GGCGAGGCCG TTCTTCGCAG CGGCGTCGAT
CTGTTGGTGG TCTCGGTCGG CGCCCTCGCC GATCCCGCGC TCGAGCAGCA ATTACGGACA
GCCGCCCGGC ACGGGGGCCG CCTGCTGATC GCCGCGGGCG CCTTGAGCGG CCTCGACGCA
CTCAGCACGG CGCGCGAGGC CGGCCTGGAT TCGGTGTCCT ATGTCGGCAA GAAGGCGCCA
GCGGCTTGGA CCAACACGCC CGCGGAAGAC ATGGTGGACC TGACATCGAT CACGTCGGCC
GTGACATTCC TCGAATGCGA CGCGCGTACA GCCGCGCTCC GCTTCCCACA GAACGCCAAC
GTGGTCGCGG CCATCGCACT GGCCGGGCTC GGCTTCGAGC GCACGCAGGT GAGCCTCGTC
GTCGATCCGG CGTCGAACGG CAACAATCAC TCCTTCGTAG CCCGCGGCGC ATTCGGCGAG
ATCGCCATGA CGACGCGCTC GGCCACCCTG CCTGCCAATC CCAAGACATC CATGCTGGCG
CCCTACAGTC TCGTGCAGAC CATCAAGAAG CACGCCGGTT TGATCATCGT TTGA
 
Protein sequence
MKIAVIGYGA IGRFLIEQLD AVPDFEIAAV YSVPAPPDRA ERVVDDLDAL LATRPDLVVE 
CAGHRALSEC GEAVLRSGVD LLVVSVGALA DPALEQQLRT AARHGGRLLI AAGALSGLDA
LSTAREAGLD SVSYVGKKAP AAWTNTPAED MVDLTSITSA VTFLECDART AALRFPQNAN
VVAAIALAGL GFERTQVSLV VDPASNGNNH SFVARGAFGE IAMTTRSATL PANPKTSMLA
PYSLVQTIKK HAGLIIV