Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3101 |
Symbol | |
ID | 3910902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3533562 |
End bp | 3534254 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637885005 |
Product | TetR family transcriptional regulator |
Protein accession | YP_486710 |
Protein GI | 86750214 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.359837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.83525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGCGCA GAAGCAGTGA TCCGGCTCGC GTTCGCGAGA AGATACTCAA GCTCGCCATG GAGGAATTCG CTCGCACCGG CTTCGACGGC GCGCGGGTCG ACCGGATCGC GGAGCGATCC AAGGTCAGCA AGAACATGCT GTATTACTAC TTCAAGTCGA AGGAAGGGCT GTTCGTCGCG GCGCTGGAGC GGATGTACGA GGAGGTGCGC GACCAGCAGC GCGAGCTGTC CGTCCGCGCC CATGACCCGA TCCTGGCGAT GAAGCAACTC GTCGAACACA CCTTCCAGGC GCTCGAGAGC AATCCGAACG CGATCCGGCT GATGAACGAA GAGAACAAGC AGCGCGGCCG GTTTCTGCGA AAATCCAAGC GGATCCGCGA TCTCTACAAT CCGCTGGTGG AAACGATCAG CTTCATCCTC GAACGCGGCC GGGTGGAAGG CGTGTTCCGG CCTGGCCTCG ACTCGGCGGT CGTCTACATG ACGCTGTCGT CGCTGTGTTA TCATTATCTG TCCAACCGCT ACACGCTCGA AATCGCGTTG GGCAAGGATC TCGCCTCGGC AGCCTCGCGC AAGGCCTGGG TCGAACACGT CGGCAACATC GTGCTGCTGT ACTGCACAGC AGAAGTGCCG AGCACGACCG CGGCGAAGAC CGCCGTGATG CGGCAACGCG CGACGTCCGA CGCAGACGCG TAG
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Protein sequence | MARRSSDPAR VREKILKLAM EEFARTGFDG ARVDRIAERS KVSKNMLYYY FKSKEGLFVA ALERMYEEVR DQQRELSVRA HDPILAMKQL VEHTFQALES NPNAIRLMNE ENKQRGRFLR KSKRIRDLYN PLVETISFIL ERGRVEGVFR PGLDSAVVYM TLSSLCYHYL SNRYTLEIAL GKDLASAASR KAWVEHVGNI VLLYCTAEVP STTAAKTAVM RQRATSDADA
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