Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3087 |
Symbol | |
ID | 3910888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3518689 |
End bp | 3519906 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637884992 |
Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
Protein accession | YP_486697 |
Protein GI | 86750201 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATTA TTCAAGTTGC GACAGCGCGA AATCTTCCCG CGGAGCCCAA GCGGGTCTTG GGTCTGTTCG GCGGTGAGAT CGCCGAGCAG GAGTGGGTGA GAAACGCTGT CGACATTCTC GAAGCGGATG CGAGGCGCTC GGCCGACACG CATCTCTTCA AGCTGCGCTT TCCGGGCCTC GACGGCATCG ACGTCTATTT CAAGGACGAG AGCACGCATC CGACCGGCAG CCTGAAGCAT CGCATGGCGC GGTCGCTGAT CATGTTCGGA CTGTGCAATG GTTTGATCGG ACCGGGGACC GCTCTGGTGG AGGCGTCATC GGGGTCGACG GCCGTATCGG AAGCATACTT CGCCGAGCTG CTCGGCCTGC CCTTTATCGC CGTGGTGCCG CGTTCAACGT CGCGCCAGAA GGTCACGGCG ATCGAACGGT TCGGCGGCCG ATGCCACTTT GTCGACAGGT CGTCGGAGGT TTACGGCGCG GCCCAGATGA TCGCCGCCGA TCTCGGTGGT CTGTATCTCG ACCAGTTCAC CTATGCCGAG CGCGCGATCG ACTGGCGCAC CGGCAATATC GCCGAGAGCA TCTTCAAGCA GATGGCCGGC GAGCGTCACC CGGTGCCCGA ATGGATCGTG ATGAGCACCG GCACGGGCGG CACTTCTGCG ACGATCGGCC GCTACATTCG ATTCAGCAGA CAGAAGACGC GGCTCTGCGG AGTCGACGTC GAGAACTCCT GCTTCTTCGA AGCCTATAAG TCGAGCAGCC GCACCGCCAA TTGCATCCGT GGCTCGCGCA TCGAGGGCGT CGGACGTCCG CGCGTCGAGC CGTCCTTCGT GCCCTCCGTG ATCGATCAGA TGATGCGAGT CCCCGATGCC GCGTCGATCG CTGCGACGCG GGTGCTGACG TCGCGGCTGT CGCATCGGGT CGGCGGATCG ACCGGCGCCA ACTTCATCGG ATTGTGCTGG TGCGCGGCCG CGATGCTGCG TGAGGGGCTT TCTGGATCGC TGGTGACTGT TCTGTGCGAC GACGGCGAGC GTTATTCGGA CACGTACTAC AACGACGACT GGTTGAAAGA GCAGGACATC GTCATTGCGC CCTATGTCGC GGCGATCGAG CGGTTTCTCG ACTCCGGCGT GTTCGAGATG CCGGCTGATG GCGCGGGATT TGAATGTGCG AGCCGGCCGA CCCCACGCGC GCGCAATGCG AGCGAAGACG GCGTGTGA
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Protein sequence | MTIIQVATAR NLPAEPKRVL GLFGGEIAEQ EWVRNAVDIL EADARRSADT HLFKLRFPGL DGIDVYFKDE STHPTGSLKH RMARSLIMFG LCNGLIGPGT ALVEASSGST AVSEAYFAEL LGLPFIAVVP RSTSRQKVTA IERFGGRCHF VDRSSEVYGA AQMIAADLGG LYLDQFTYAE RAIDWRTGNI AESIFKQMAG ERHPVPEWIV MSTGTGGTSA TIGRYIRFSR QKTRLCGVDV ENSCFFEAYK SSSRTANCIR GSRIEGVGRP RVEPSFVPSV IDQMMRVPDA ASIAATRVLT SRLSHRVGGS TGANFIGLCW CAAAMLREGL SGSLVTVLCD DGERYSDTYY NDDWLKEQDI VIAPYVAAIE RFLDSGVFEM PADGAGFECA SRPTPRARNA SEDGV
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