| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3086 |
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| Symbol | |
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| ID | 3910887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3517479 |
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| End bp | 3518648 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637884991 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_486696 |
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| Protein GI | 86750200 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.985379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATTG AGAACTGGAC CGCGCGCTAC CTGGACGAAC TCAAGGAGTT TCGTCACGAT
CTGCACCGCA ACCCCGAGTT GCTGTACGAC GTTCATCGCA CCGCCGAGCG GGTCGCGGCG
CGGTTGCGCG AAGCCGGCGT CGACGAGGTG CACGAAGGCA TCGGCGGAAC GGGCGTCGTC
GGAATCATTT ACGGCCAATC GCGTAGTTCC GGCCGGATGA TCGGGCTGCG CGCCGATATG
GATGCTTTGC CCATTCTCGA GGCAACTGGC GCGGAATGGG CCTCGCAAGT CCCCGGCAAG
ATGCACGCAT GCGGCCACGA CGGCCACACC ACCATGCTGT TGGGTGCGGC GCTTGGCCTC
GTCGAGAGCC GGGCCTTCGA CGGCGGCGTC GCGCTGATCT TCCAGCCCGC CGAAGAAGGC
GGTGCGGGCG CCAAGGCCAT GCTCGATGAT GGCCTGCTGC AGCGCTTTCC GATCCAGGAA
TTCTACGGGA TGCACAACCG CCCGGGACTT CCCTTGGGGA CGTTTGCGAC GGGCCCAGGG
CCGCAAATGG GTTCGGTCGA CGAGATCATC ATCTCGATCG AAGGTCGCGG CGGCCACGCC
GCTCAGCCGC ATGCCACGGT CGATCCGGTG GTCGTTGCCG CGGCGTTGAT TCAGGCGACT
CAGGCGATCG TCTCGCGCAA TCTCGATCCA CTGCAATCCG CGGTTATTTC GATCACACAG
ATGACCGCCG GTGACGCGTT CAACGTCATT CCTCAAACGG TGACATTGCG CGGCACGGTT
CGCACGCTGG ACGAGCCGAC CCGCGACATG GTTGAAAAGC GGCTGCGCGA ACTCACCGAG
AGTATTTCGG CGGGGTTCAG CGCTGTCGGT ACGCTGTCTT ATCTGCGGCA CTACCCTGTG
ATGAGAAATT CCGAAGTCGG CGTCGACCGC GCGGTCGCGG CGGCCGGAGA AGTGGCCGGC
GTCGCGCACG TCGACGCCAC AATGGCTCCG ACGCTGGGCG GCGAGGACTT CGCGTTCATG
CTGAACGAGC GGCCTGGCGC GATGATCATG ATCGGTAACG GCGATAGCGC CCCGCTGCAT
CATCCGCGCT TCGATTTCAA CGACGACGTC ATCCCGTGGG GCTGTTCGTA TTGGACCGCC
TTGGTCCGCC AGCGCATGCC GTTGGTCTGA
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| Protein sequence | MPIENWTARY LDELKEFRHD LHRNPELLYD VHRTAERVAA RLREAGVDEV HEGIGGTGVV
GIIYGQSRSS GRMIGLRADM DALPILEATG AEWASQVPGK MHACGHDGHT TMLLGAALGL
VESRAFDGGV ALIFQPAEEG GAGAKAMLDD GLLQRFPIQE FYGMHNRPGL PLGTFATGPG
PQMGSVDEII ISIEGRGGHA AQPHATVDPV VVAAALIQAT QAIVSRNLDP LQSAVISITQ
MTAGDAFNVI PQTVTLRGTV RTLDEPTRDM VEKRLRELTE SISAGFSAVG TLSYLRHYPV
MRNSEVGVDR AVAAAGEVAG VAHVDATMAP TLGGEDFAFM LNERPGAMIM IGNGDSAPLH
HPRFDFNDDV IPWGCSYWTA LVRQRMPLV
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