| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3082 |
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| Symbol | |
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| ID | 3910883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3513218 |
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| End bp | 3514825 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637884987 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_486692 |
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| Protein GI | 86750196 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.49552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGCC ACATCAACAG ACGAGTGTTT CTGGGTACGT CCGCCCTTGC GGCGATCGCC
GCCGGAACGT CACTTTGCTT TCCACCTGCT GCACTCGCGC AGGAGAAGCC GAAGAAGGGC
GGCGTGCTGG TAGCGACCTG GGGTGGCTTC GAGCCGCAGG CCGTGTTCGT TCCCGGCGGC
GGTGGCTCCA GCCCGCTGAT CAGCTCGACC AAGATCCTGG AGCCGCTGCT GCGCCAGGAC
AGCCAGGCCG GCTTCCTTCC CGTGCTGGCC ACCGAGGTCA AGCCTTCGGC CGATTTCAAG
TCGTACGACA TCGTGCTCCG TAAAGGCGTG ACGTGGCACG ACGGCAAGCC GTTCACCGCA
GACGACGTGG TCTTCAGCAT CGAAAAATAC TGGCTGCAGA CGATCGCCAA GGCGGCGCTG
AAGAATTTCT CCGGGGCCGA GGTGACCGAA GGCGGGGTGC GCGTGAGCTT CAAAGAGCCG
ACGCCGGAGT TCTTCTTCAA GTCGGTGCTG GCGACCTCGC TGGTCATTCC GAAGCACGTC
TACGACGGCT CGGAGATCGT TACCAACCCC GCCAATAACG CGCCGATCGG CACCGGTCCG
TTCAAGTTCA AGCAGTGGGT GCGCGGCAGC CATATTGAAT ATGCCGCCAA CGACAAATAT
TGGGATGCGG GCAAGCCCTA TCTCAACGGC CTGGTGATGC GCTACTGGCG CGACGCCGCA
TCGCGCACCG CGGCCTTGGA AGCCGACGAA CTGCAGCTCG GCATCTTCAA CCCGATCCCG
ACCCCGGACA TCGACCGGCT GTCCAAGTCC GGCAAGTTCG TCGCATCGAA CGACGGCTAT
CTCGGCGCGG CCTGGGCTTC GACCATCGAA TTCAACAGCC GCCGTGATAT CGTCAAGGAC
CCGGCCGTGC GCCGCGCACT ACTCACCGCC ATCGACCGGG CGACCATCTC GGACGTTGTG
TATTTCGGCC GCGCCAAGCC CGGCACGTCC TTCGTCAGCT CGACAAACCC GAAATTCTAC
AATCCGAACC TGCCGCGATA CGAGTTCGAC GCGAAGAAAG CCGCCAAGAT GCTCGACGAT
GCCGGCTACC CGAAGAAGGG CAAGTCGCGC TTCAAGGTTC ACTTGCTTGC GGCCGGCTGG
TTCGAGGAGA ACGGCAAGGT CGGCCAGTTC GTGAAGCAGA ATCTGGAAGA CATCGGCGTC
GAAGTGACGC TCACCGTGCC CGACCGAGCG ACTTCGCTGA AGCAGATCTA CGGCGATTAC
GACTACGACA TCGCGCTGTC GAACTACGCG GCGCGGGTCG AGCTGGTTCC CCAGCAGACC
GACTACCTCA GCACGAGCGG GATTGTGAAG GGCGCGGCCT TCCGCAACGC CACCGGCTAT
TCCAATCCCG AAGTCGACGA CATCGTCGCC AAGATGTCGG TGGAGTCCGA CGAAGCCAAG
CGGAAGGACT TGGCCTTCAA ATTGCAAGAG ATTGCAGCGC GAGATCTGCC GATCACCGTT
CTGGTCGAAC TGATCCCGAC GACGATGATG TCGAAGAAGG TCAAGGGCGT CGGCAATCGC
GCCGATATTT CGGCGGACAG CCTGTCGGAC GTTTGGCTCG ACGTCTGA
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| Protein sequence | MTSHINRRVF LGTSALAAIA AGTSLCFPPA ALAQEKPKKG GVLVATWGGF EPQAVFVPGG
GGSSPLISST KILEPLLRQD SQAGFLPVLA TEVKPSADFK SYDIVLRKGV TWHDGKPFTA
DDVVFSIEKY WLQTIAKAAL KNFSGAEVTE GGVRVSFKEP TPEFFFKSVL ATSLVIPKHV
YDGSEIVTNP ANNAPIGTGP FKFKQWVRGS HIEYAANDKY WDAGKPYLNG LVMRYWRDAA
SRTAALEADE LQLGIFNPIP TPDIDRLSKS GKFVASNDGY LGAAWASTIE FNSRRDIVKD
PAVRRALLTA IDRATISDVV YFGRAKPGTS FVSSTNPKFY NPNLPRYEFD AKKAAKMLDD
AGYPKKGKSR FKVHLLAAGW FEENGKVGQF VKQNLEDIGV EVTLTVPDRA TSLKQIYGDY
DYDIALSNYA ARVELVPQQT DYLSTSGIVK GAAFRNATGY SNPEVDDIVA KMSVESDEAK
RKDLAFKLQE IAARDLPITV LVELIPTTMM SKKVKGVGNR ADISADSLSD VWLDV
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