Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3079 |
Symbol | |
ID | 3910880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3510369 |
End bp | 3511373 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637884984 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
Protein accession | YP_486689 |
Protein GI | 86750193 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.41088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCGC TGCTCGAAAT TCGCGATCTC GAAGTTGATC TGTTCACGCG GCGCGGCGTG ATGCGCGCGA TCGACCGCTT TTCCCTCACC GTCGAACACG GGCAGACGCT TGGCCTGGTC GGTGAGTCCG GCTGCGGCAA ATCCATGACT TCGCTGGCGA TCATGGGGCT GCTACCGATG CCGCCGGCAA AGGTGACGGG CGGCGCCATT CTGCTCGAAG GCCGCGATCT CATCGGCTTG AGCGACACCA GGATGCAAGC GGTGCGGGGA CGCGAGATCG GGATCATCTT CCAGGACCCG ATGAGCTCGC TGAACCCGGT CTACACCGTC GGCTATCAGC TCACCGAGGT GCTCCGCCGG CATTTCAAGC TGGATCGACG CGCCGCGGAC AGGCGGGCGT TGGAATTGCT GGACCGGGTG CACATTCCGG ATGCCCGGCG TCGCTTCGAT GCCTATCCGC ACGAATTGTC CGGCGGCATG AATCAGCGCG TCGTCATCGC CATGGCGATC GCGTGCGAGC CGAAGTTGCT GATCGCCGAC GAACCGACCA CGGCGCTCGA CGTCACCATC CAGGCACAGA TCATCGAACT GCTCAAGGAC ATCCAGCGCG AATCCCGGAT GGGGATGATC TTCATCACCC ACGATCTCGG GGTGATCGCC GATGTCGCCG ACCGCGTCAC CGTGATGTAC GCGGGCAAGA AGGCCGAGGA GGCACCGGTT GGCGTACTCT TCGACGATCC ACGCCATCCC TATACGCGGG GTCTGATCGG CGCCACGCCG AAGCCGGGCG AGGAACGGCG GCGGCGGCTC GTCGAAATTC CCGGGACCGT GCCGGGCTTA TCGGACCGTC CGAAAGGCTG CGCTTTCGCC AACCGCTGTC CGCTGGTGTT CGAGCGTTGC CGCGTCGAAC ATCCGGCTTT GATCAATCAG GGTGCGGGCC ACGAGGCTGC CTGCTTCCTG GCTACCGAAA CGGAGGACTA CAATGTCGCT TCTGTCGGTG CGTAG
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Protein sequence | MAALLEIRDL EVDLFTRRGV MRAIDRFSLT VEHGQTLGLV GESGCGKSMT SLAIMGLLPM PPAKVTGGAI LLEGRDLIGL SDTRMQAVRG REIGIIFQDP MSSLNPVYTV GYQLTEVLRR HFKLDRRAAD RRALELLDRV HIPDARRRFD AYPHELSGGM NQRVVIAMAI ACEPKLLIAD EPTTALDVTI QAQIIELLKD IQRESRMGMI FITHDLGVIA DVADRVTVMY AGKKAEEAPV GVLFDDPRHP YTRGLIGATP KPGEERRRRL VEIPGTVPGL SDRPKGCAFA NRCPLVFERC RVEHPALINQ GAGHEAACFL ATETEDYNVA SVGA
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