| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3069 |
|---|
| Symbol | |
|---|
| ID | 3910870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3501780 |
|---|
| End bp | 3502592 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637884976 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_486681 |
|---|
| Protein GI | 86750185 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCTA TGACCGCAAC GACGATGCTC GCGGCGTGCG CGGGCCTGTT CGCCCTTTCG
GTGGCCGGTC CCGCCGTCGC GGCGCCACGT CCAGCCGATT GCACGCTGGT GGTGAACGGC
AAGACCTATA TCAGTGGGGT CTGCGACTTC GACGCCGACA AGGACGGCTC ATTCCGGATC
AGCGGCGGCG ATTACTTCGC CTATGTCAAC GTCACCGGGA AGAACCGGGC GGAAGCGAGC
TGGAACGCGG ATCCGGCATC GATCCACGCG CACGCTCCAC TCGGCGAACT GACGCGCAAG
GGCGCCTGCT GGGTCGGTCG CGGCGTCGAG ATCTGTGCTC GCAATCTGTC GCCGGAAAAA
CTTGCCGCGG CGCAGGCAAG CCGTCCAGGC GGCGAGATGA TCAATCCGGA TTTGCCCGGC
GCATCGTCGA GCTGTGTCGG CGCGCGCGAC CAGCGCTGGG AGGCCGGCGT CGACCTGGTG
CTGCGCAATT GCAAGCTGCC CGCCGACAAG GTTTTCATTC GCGCCGACGG CGCCTTGACG
CTCGACCAGC ATCCCGGCCT CTGCATCGAC GCGCAGTCGG CGCCAAACGG AGGCGCCGCG
AAACTGGTGC TCGAAGCTTG CGACCGCACG GCGGCGCGGT GGCAGTCGAA AGCCGCCTCC
ACCGATTCCG CGGCCATCCG CTCGGCCGAG GGGCTGTGCT GGAAGGTCGA TGCGCCGAAG
GACGAAAACG CGCCGTTTCC ATTCGCGATG CTCGCTGCAC CTTGCGACGC CGACCCGGCG
CAAGACGCGA AGTTTATCTT CGCGAAGGAA TGA
|
|---|
| Protein sequence | MRAMTATTML AACAGLFALS VAGPAVAAPR PADCTLVVNG KTYISGVCDF DADKDGSFRI
SGGDYFAYVN VTGKNRAEAS WNADPASIHA HAPLGELTRK GACWVGRGVE ICARNLSPEK
LAAAQASRPG GEMINPDLPG ASSSCVGARD QRWEAGVDLV LRNCKLPADK VFIRADGALT
LDQHPGLCID AQSAPNGGAA KLVLEACDRT AARWQSKAAS TDSAAIRSAE GLCWKVDAPK
DENAPFPFAM LAAPCDADPA QDAKFIFAKE
|
|---|
| |