| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3056 |
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| Symbol | |
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| ID | 3910857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3485914 |
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| End bp | 3487461 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637884963 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | YP_486668 |
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| Protein GI | 86750172 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.994596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGGC AAGAACAACG CGCGGCGCTA CAACGGAAAA TCTGGGATAT CGCAAACGAT
GTTCGCGGCT CCGTTGATGG CTGGGACTTC AAGCAATATG TCCTAGGTAC ACTCTTCTAT
CGGTTCATCA GCGAGAACTT CGCCGCTTAT ATCGAGGCGG ATGATGAGAG CATCGATTAT
GCGGCTCTAT CCGATGACGT CATCACCGAT GACATCAAGG ATGATGCCAT CAAGACCAAG
GGCTATTTCA TCTATCCCAG CCAGCTGTTC GTGAATGTCG CGAAGAACGC CAACATCAAT
CACAGCCTGA ACACCGACCT AGCGCACATC TTCGCGGCGA TTGAATCATC GGCCAATGGC
TACCCTTCCG AGCAGGACAT CAGAGGTCTT TTCGCCGATT TCGACACGAC CAGCACGCGT
CTTGGCCATA CCGTCTCGGA AAAGAACAGC CGATTAGCCA AGGTCCTGAA ACGCGTTGCA
GAGCTCGATT TCGGCGACTT CCACAACAGC CAGATTGATT TGTTCGGCGA TGCCTACGAA
TTCCTGATCT CGAACTACGC CGCCAATGCG GGCAAGTCCG GCGGGGAGTT CTTCACGCCT
CAACATGTCT CAAAGCTCAT CGCGCAGCTC GCCATGCACG GGCAAACACA AGTTAACAAG
ATTTACGACC CGGCCTGCGG CTCCGGCTCG CTACTGTTGC AGGCGAAGAA GCATTTTGAC
GAACATATCA TCGAAGAGGG TTTCTTTGGG CAGGAGATCA ACCACACGAC CTACAACCTC
GCCCGCATGA ACATGTTCCT GCACAACATC AACTACGACA AGTTCAATAT CCAGCGCGGC
GATACGCTGA CCCAGCCGCA TTTCCAGGAC GACAAACCCT TTGACGCCAT CGTCTCCAAC
CCGCCTTATT CGGTAAAGTG GATCGGCTCA GACGATCCGA CCCTAATCAA CGATGACCGC
TTTGCTCCGG CGGGGGTGTT GGCACCCAAA TCAAAGGCCG ATTTCGCCTT TGTGCTCCAT
GCGCTTAGCT ATCTCTCGGC CAAGGGCCGC GCGGCGATCG TCTGCTTTCC GGGCATTTTC
TATCGCGACG GGGCGGAGAA GAAGATCCGA CAATATCTGG TCGATAACAA TTACGTTGAG
ACAGTGATAG CGCTCGCCTC CAACCTCTTC TATGGCACGA CCATCGCCGT GACGATCCTT
GTCCTCGCCA AGAACAAGAC GGACACGGCC ATCCAGTTCA TCGACGCCAG CGGCGAAGAG
TTTTTCAAGA AGGCCACCAA CACCAATCTG ATGACGGACG ATCACATCGC GCGGGTGATG
GAGATTTTTG ATCGTAAGGA AGACGTCGAT CATGTCGCCG CCTCGGTGCA GTATGAGATC
ATCGTGGAGC GCGGCTATAA CCTCTCGGTC AGCTCCTATG TCGAGCCGCG CGACACGCGC
GAGATTGTCA GTATTGGTGA GCTGAATGCG AAGATCAGAA CCACGGTTCT GCGGATCGAC
CAGCTGCGCG CCGACATCGA CGCCATCATT GCGGAGATTG ACGCATGA
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| Protein sequence | MTGQEQRAAL QRKIWDIAND VRGSVDGWDF KQYVLGTLFY RFISENFAAY IEADDESIDY
AALSDDVITD DIKDDAIKTK GYFIYPSQLF VNVAKNANIN HSLNTDLAHI FAAIESSANG
YPSEQDIRGL FADFDTTSTR LGHTVSEKNS RLAKVLKRVA ELDFGDFHNS QIDLFGDAYE
FLISNYAANA GKSGGEFFTP QHVSKLIAQL AMHGQTQVNK IYDPACGSGS LLLQAKKHFD
EHIIEEGFFG QEINHTTYNL ARMNMFLHNI NYDKFNIQRG DTLTQPHFQD DKPFDAIVSN
PPYSVKWIGS DDPTLINDDR FAPAGVLAPK SKADFAFVLH ALSYLSAKGR AAIVCFPGIF
YRDGAEKKIR QYLVDNNYVE TVIALASNLF YGTTIAVTIL VLAKNKTDTA IQFIDASGEE
FFKKATNTNL MTDDHIARVM EIFDRKEDVD HVAASVQYEI IVERGYNLSV SSYVEPRDTR
EIVSIGELNA KIRTTVLRID QLRADIDAII AEIDA
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