| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3038 |
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| Symbol | |
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| ID | 3910838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3463303 |
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| End bp | 3465525 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884945 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_486651 |
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| Protein GI | 86750155 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGGTA TTGATCTCCG GCAGATGGCT GGACGCGGCA TCGCGGTCGG CTGTGTGATT
TTCAGCAGCG GCTTATCATC GGCAACGGCG CAGGAGCAAA CACCCCGGGC GCCGGTCGAA
ACCTTGCCGC AGATCGCGGT CGATGCCCCG CCGCGCGTGG CGCGCAGCGC GGTACGACGT
CCGGTACGCC CGTCCGCGAC ATTCCCGGAA CGTCGGGTGC CCGCACCGGC GCCAGCCGCG
ATCGCGGATG CGGCGCTCGC CGCCGCCAGC TCCGGGCCGG CGCCGCTCAG CGCCCCACAG
AACCAGGCCG CCAGCGCGCG CGTGATCAGC GGTGCCGAAA TCAACGCGAT GCCGGTCGCA
CGGGTCGGTG AGGTGCTGGA GGCGGTGCCC GGGCTGGTCG TCACCCAGCA CTCCGGCGAG
GGCAAAGCGA ACCAGTATTT CCTCCGCGGC TTCAATCTCG ACCACGGCAC CGATCTGGCG
ATCACCGTCG ACGGCATGCC GGTCAACATG CCGACGCACG GCCACGGCCA GGGCTATGCC
GATATCAATT TCATGATTCC GGAGTTGATC AGCGCCCTGA CGCTACGCAA GGGACCCTAT
TTCGCCGATG TCGGCGATTT TGGTTCGGCA GGCGCCGTGG GTATCGATTA TTTTCGCGCG
ATGCCGAAGA CCATCGCCGA AGTCACGATG GGCAGCTTCG GCTATCGACG GCTGCTCGGC
ACCGGCTCGA CGAAGGCGGG CGAGGGGACG GTGCTCGCCG CCTTCGAAGC ACAAACCTAT
AACGGCCCCT GGGACGTGCC CGACAACGTC CGCAAGCTGA ACGGCGTGCT GCGCTACAGC
CAGGGCACGG TAACGGACGG CTTCTCGCTG ACCGGCATGG CCTATGCCAA CCGCTGGACC
TCGACCGATC AGGTCGCGCA GCGCGCGATC GATCAGGGCG TGATCGGCCG CTACGGCTCG
CTCGATCCGA CCGACGGCGG CAATTCCAGC CGATTCAGCC TGTCCGGACG GTTCGCGCGC
TCGAGCGACA TCGGCCAGAC CGATCTCAAT GCCTATGTGA TCCGGTCGTC GATGCAGCTC
TACAACAATT TCACTTACTA TCTCGACGAT CCGGTCGACG GTGATCAGTT CAACCAGTAC
GACCGCCGCA TGGTGATCGG GCTGAACGGC ACCCAGCGCT TCGACTATCG GTTCGCAGGG
CTACCGGTGG AAACGCGCGT CGGGCTTCAG AGCCGCGCCG ACAGTATCGA TCTGGGCCTC
ACCAAGACGT TGCAACGCAA TTGGCTGTCG ACGGTGCGCG CCGACGACGT CACCGAGCAG
TCGCTCGGAC TGTGGACCGA CACCACGGTG CGCTGGACCG ACTGGCTGCG CACCACGGCG
GGTGTCCGCG AAGATTATGT CGGCGGCCGC GTGCGCAGCG ACACGCCGGC GAATTCCGGC
TCGGCCTCCG CGACGATGAC CAGTCCCAAG GTCGGGATCG TGCTCGGCCC GTGGCTCGCG
ACCGAGTTCT TCGGCAATGC CGGCACCGGC CTGCACAGCA ACGACATTCG CGGTGCGACC
ATCACTGTCG ATCCGACCGA CAAGATCACG CCGGCAGACC GTGTGCCGCT GCTGGTGCGC
TCGAAAGGCG CCGAACTCGG CGTCCGCAAT CGCCTGGTCC CTGGGTTGAC CACGTCGCTG
GCGGTGTTCG TGCTCGATTT CGATTCCGAA CTGCTGTTCG TCGGTGACGC CGGCACCACC
GAGGCGAGCC GGCCGAGCCG GCGCGTCGGC GTCGAGTGGA CCAGCCAGTA CAGGCCGCTG
CCGTGGCTGG GGTTCGATTT CGACGTCGCC TACACGCGGG CTCGCTTCAC CGATGTCGAT
CCGGCCGGCG ATCTGATTCC CGGCGCGCCC GCCTGGGTGG CGAGCACCGG GCTGACGTTC
GGACGGGAAA CCGGCTGGTT CGGCGCGCTG AAAGGCCGCT ATTTCGGACC CCGGCCGCTG
ATCGAGGACG GCAGCGAGCG CTCGCTGGCG TCACTGATTT TCAATGCCCG TGCGGGCTAT
CGCTTCGAAA ACGGGCTGCG GTTTCAGCTC GACGTCTTGA ACCTGTTCAA CGCCAAGACC
AACCAGATCG AGTACTACTA TCTTTCCCGC CTGCCGGGCG AGCCGCTCGA TGGCGTCGGC
GACCGCCACG TCCATCCGGC GGAACCGCTG GCCGTGCGGC TGACATTGGC CGGCGCATTC
TGA
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| Protein sequence | MLGIDLRQMA GRGIAVGCVI FSSGLSSATA QEQTPRAPVE TLPQIAVDAP PRVARSAVRR
PVRPSATFPE RRVPAPAPAA IADAALAAAS SGPAPLSAPQ NQAASARVIS GAEINAMPVA
RVGEVLEAVP GLVVTQHSGE GKANQYFLRG FNLDHGTDLA ITVDGMPVNM PTHGHGQGYA
DINFMIPELI SALTLRKGPY FADVGDFGSA GAVGIDYFRA MPKTIAEVTM GSFGYRRLLG
TGSTKAGEGT VLAAFEAQTY NGPWDVPDNV RKLNGVLRYS QGTVTDGFSL TGMAYANRWT
STDQVAQRAI DQGVIGRYGS LDPTDGGNSS RFSLSGRFAR SSDIGQTDLN AYVIRSSMQL
YNNFTYYLDD PVDGDQFNQY DRRMVIGLNG TQRFDYRFAG LPVETRVGLQ SRADSIDLGL
TKTLQRNWLS TVRADDVTEQ SLGLWTDTTV RWTDWLRTTA GVREDYVGGR VRSDTPANSG
SASATMTSPK VGIVLGPWLA TEFFGNAGTG LHSNDIRGAT ITVDPTDKIT PADRVPLLVR
SKGAELGVRN RLVPGLTTSL AVFVLDFDSE LLFVGDAGTT EASRPSRRVG VEWTSQYRPL
PWLGFDFDVA YTRARFTDVD PAGDLIPGAP AWVASTGLTF GRETGWFGAL KGRYFGPRPL
IEDGSERSLA SLIFNARAGY RFENGLRFQL DVLNLFNAKT NQIEYYYLSR LPGEPLDGVG
DRHVHPAEPL AVRLTLAGAF
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