| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3036 |
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| Symbol | |
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| ID | 3910835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3460395 |
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| End bp | 3461837 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637884942 |
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| Product | putative Omp2b porin |
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| Protein accession | YP_486649 |
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| Protein GI | 86750153 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.246228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGG TTAAGAGCCT TTTCCTTGGC TCCGCGGCGG CTCTCGTCGC CATGAGCGGC
GCGCAGGCGG CCGATCTTCC GTTGAAGGCC AAAGCGGTCG AGTACGTGAA GGTTTGCTCG
ATCTACGGCG CCGGCTTCTA CTACATCCCG GGCACCGACA CCTGCATCAA GCTCGGCGGC
TATCTGCGCG CCGACGTGAC GATGTACGGT GGCGCCGCCT ATAACGCCCC GGCCTGGAAC
GGCAACGCCG GCCAGCAGAA CCGCCTCGCG AACAACACCA TCTTCCGTTC GCGCCAGGAC
ATCAACATCG ACACCCGCAC CGCCACTGAA TACGGCGTGG TTCGCACCTA CTTCGATGCG
ACCTTCAACT GGACCACGGG CGACGCCGTC GCCGGCGGTA CGCTCGGCGT CTACTACGCC
TTCATCCAGT TCGCCGGCTT CACCTTCGGT AAGGCCGTGT CGCAGTTCGA TACGCCCTGG
ACCGGTTATC CGGGCAACAA CACCTCGTTC CTGATCGGCG GCTACGACGA CGTCACCGGC
ATCAACCAGG TCGCCTACAC TGCGGAATTC GGCAACGGCG TGTCGGGCTC GATCTCGCTC
GAAGACCAGT CGTCCTACCT GCAGTCGGCG CTGTACAACA CCTCCGGCCT GACCAACGCC
GGCTTCGCCT CGGGCGTGTT CGGCACCAAC TCCTACGCCG GTACCCAGAT CCCCGACATC
GTCGGTAAGA TCCGCGTCGA CCAGGCCTGG GGTCTGTTCC AGGTGTCGGC TGCGGCCCAC
CAGGTTCGCG CTTCCTACTA CACGCCGGCT CTCGAGACCT CGGGTCATCC GAGCGACACT
TGGGGCTACG CGGTGCAGGG CGCAATCTCG CTCAAGAACC TGCCGACCGG CCCCGGCGAC
AGCATCAACT TCACGGCGAC CTACTCGAAC GGTGCGACCC GTTACGTGCT CGGCGGCGTG
AGCCCGAGCT CGTTCGCGAT GTACGGCAGC TCCGGCGTCG GCTACCAGAG CCTGGCTCTG
GCGGGTGCGG CCGATGGTAT CTTCGCGGGC ACCAACAACA TCAACGGCAC CGGCATCACC
AAGACCGATG CCTGGGGCGT CCGTGGCGCG TTCAACCACA ACTGGAACCC CAACTGGTCG
ACCTCGCTGT TCGGTTCGTA CACCTCGATC GACTACAACG GCACGGCGAC TGCCCAGATC
TGCGCCACGG CTGTCGGGTT CACCTGTAAC CCGGACTTCC GTATCGCTCA GATCGGCACC
GTCACCCGCT GGACCCCGGT CAAGAACCTG ACGTTCTCGG GCGAAGTGAT GTACACCTAC
CTCGACCAGA GCCATTCGGG TCTGGTGGCC CTGGCTCCGG GCGCGACCAA GCCGGCCGCG
AACTACGAGC TCAAGGACCT CGGCACCTGG AGCGGCAACC TCCGCGTTCA GCGCGTGTTC
TGA
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| Protein sequence | MNMVKSLFLG SAAALVAMSG AQAADLPLKA KAVEYVKVCS IYGAGFYYIP GTDTCIKLGG
YLRADVTMYG GAAYNAPAWN GNAGQQNRLA NNTIFRSRQD INIDTRTATE YGVVRTYFDA
TFNWTTGDAV AGGTLGVYYA FIQFAGFTFG KAVSQFDTPW TGYPGNNTSF LIGGYDDVTG
INQVAYTAEF GNGVSGSISL EDQSSYLQSA LYNTSGLTNA GFASGVFGTN SYAGTQIPDI
VGKIRVDQAW GLFQVSAAAH QVRASYYTPA LETSGHPSDT WGYAVQGAIS LKNLPTGPGD
SINFTATYSN GATRYVLGGV SPSSFAMYGS SGVGYQSLAL AGAADGIFAG TNNINGTGIT
KTDAWGVRGA FNHNWNPNWS TSLFGSYTSI DYNGTATAQI CATAVGFTCN PDFRIAQIGT
VTRWTPVKNL TFSGEVMYTY LDQSHSGLVA LAPGATKPAA NYELKDLGTW SGNLRVQRVF
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