| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3035 |
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| Symbol | |
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| ID | 3910834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3457737 |
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| End bp | 3459980 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637884941 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_486648 |
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| Protein GI | 86750152 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.155974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATAGCA ACCGATCCAT CCGACGCATC CCCCACCTCG CCGCCCTGTT GCGTGCGTCG
ACGGCGACGC TGGCGTTGAG CATCGGACTC AGCGGGTTTT CGATCGAGGC CCAGGCCGCT
TCCAAGAAAG TCCCGCTGCC GAAGCCGCGA CCGATCTCGC GCAGCATCGT GCCGAAGACC
GCCCCCGCGA CTGTCGCCTC CATTCCCAAG CCCTCGGCGC CGCTCGCGAT CGCCGCGCCC
ACCGCGCCGG CGATCGATGC CGCGCGTCCG CATGCGGCGC CCCCGATGGT GACTCGCAAG
CCGGCCACGC GGTCGGCAGT GGCGGCCACG GCGCAGACAT CGCAGGCCGA CGCCAACGCG
CTCGAAAACG TCATCGAGCA GGTCCGCAAG CGCAAGGCCG CCGATGCGAC GCAGATCGCG
GACACGATGT CCGATCCGCT GGCGCGCAAG CTCGCCGAAT GGATCATCCT GCGCGCGGAA
TACAACGGCG CCAGCGTCGA GCGCTATCGC GCCTTCGTGC GCGCCAATCC GAGCTGGCCG
TCGCAGACAT TCTTCCGCCG CCGCGCCGAA GCCGCGCTGT GGGACGACAA CCGCAACGAC
GACGCGGTGC TGGCCTATTT CGACAACGAG AGACCCCTGT CTGCAAAGGG CAAGCTGGCG
CTGGCGCGTG CGATGCTGGC GCGCGGCGAC CGTCGCACGG CGGAGCAGCT CGTGCGCGAC
GCCTGGCGCA ACGATTCGAT GTCGGCTGCG CTCGAAACCT CCGCGATCGA GATGTTCGGC
GCGCTGCTCA CACCGGGTGA TCACAAGGCG CGGATGGACG CGTTCCTTTA CGGCAACGAC
AATGATCCCG GACTACGCGC CGCGAAACGG CTGGGTGCCG CGCAGTTCGC GCTGGCGCGA
GCCCGCCTCG CGGTCGACAA CAAGTCCGGA CAGGGCAAGG CTTTGCTCGA TGCGGTGCCG
TCCGACCTGC ACAGCGACCC GGGCTATATG TTCGCCAGCA TCCAGACGTT GCGCCGCGAT
GAGAAGATCG CCGAGGCCGG ACGCCTGATG CTGACCGTCC CGCGCGACCC CAACCGGCTG
CACAATCTCG ACGAATGGTG GATCGAGCGG CGGCTGCTGG CGCGCAAGCT GATCGATATC
GGCGACTATC GGCTGGCCTA TCTGGTCGCC CGCAACGCCG CGACGCCGAC GCGCGAAGTC
TACAAGACCG AGCATGAATT CACCGCGGGA TGGATCGCGC TGCGGTTGCT CAAGGACCCG
GCGACCGCCG CCCAGCATTT CGCCCGGATC GGCACCGACA CCACCAATCC GACCGCGCTG
GCGCGCGCCG GCTATTGGCA GGGCCGGGCC GCGGAGGCGA TGGGCCGGAC GCAGGATGCG
CGTGCGGCCT ACTCGGCGGC GGCCGCCCAA TCGACCAGCT ATTACGGGCA ATTGGCGCGC
GCCAAGCTCG GCCTGCCGCA GCTCGACCTC AACGGCGCAC CGTCGAGCCA TGGGCGCGGC
GTCGAGCGCC TCGAAGTCGT GCGCGCGGTG CAATTGCTCT ACGCCATCGG TGAAGGCGAC
GTCGCGATCC CGATTTTCGC CGATGTCGGC GAGAACGGCG ACACCGACGC CCTGCTCGGC
CTGTCCGAAC TCGCGGCCCG CAACAACGAT GCGCGCGCGA TGCTGCTGGT CGGCAAGGCG
GCGCTCAACC GCGGCCTGCC GTTCGATCAC TACGCCTATC CGATGGTGGG CATTCCGCAG
TTCAAGCAGT TCGGCCCGGA GGTCGAGCGC AGCATCGTCT ACGCGATCGC GCGCCAGGAA
AGCGGCTTCA ATCCGGCCGT GGTGTCGCCG GCGCAGGCCT ATGGCCTGAT GCAGGTGACG
CCCGACGCGG CGAAGTATGT CTGTCGCCGT CACGGCTGCA CCTACGACGC CAGGCGATTG
AAGGACGATT CGGTCTACAA CGCCGCGCTC GGCGCGGCCG AGCTGGGCGG ACTGATCGAG
GATTACCGCG GCTCCTACAT CATGACCTTC GCCGGCTACA ATGCCGGCCG CGGCAGTGTG
CGCAAATGGG TCGAGCGTTA CGGCGACCCC CGCGATCCGA AGGTCGACGC GGTCGACTGG
GTCGAACTGA TTCCGTTCTC CGAGACCCGC AACTACGTGC AGCGCATCAT GGAGAACCTG
CAGGTCTATC GCGCGCGATT CGGCGGCGGC AATCGTCTGC AGATCGACGC CGATCTGCGC
CGCGGCGCCG CGGCGGTCGA GTAG
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| Protein sequence | MHSNRSIRRI PHLAALLRAS TATLALSIGL SGFSIEAQAA SKKVPLPKPR PISRSIVPKT
APATVASIPK PSAPLAIAAP TAPAIDAARP HAAPPMVTRK PATRSAVAAT AQTSQADANA
LENVIEQVRK RKAADATQIA DTMSDPLARK LAEWIILRAE YNGASVERYR AFVRANPSWP
SQTFFRRRAE AALWDDNRND DAVLAYFDNE RPLSAKGKLA LARAMLARGD RRTAEQLVRD
AWRNDSMSAA LETSAIEMFG ALLTPGDHKA RMDAFLYGND NDPGLRAAKR LGAAQFALAR
ARLAVDNKSG QGKALLDAVP SDLHSDPGYM FASIQTLRRD EKIAEAGRLM LTVPRDPNRL
HNLDEWWIER RLLARKLIDI GDYRLAYLVA RNAATPTREV YKTEHEFTAG WIALRLLKDP
ATAAQHFARI GTDTTNPTAL ARAGYWQGRA AEAMGRTQDA RAAYSAAAAQ STSYYGQLAR
AKLGLPQLDL NGAPSSHGRG VERLEVVRAV QLLYAIGEGD VAIPIFADVG ENGDTDALLG
LSELAARNND ARAMLLVGKA ALNRGLPFDH YAYPMVGIPQ FKQFGPEVER SIVYAIARQE
SGFNPAVVSP AQAYGLMQVT PDAAKYVCRR HGCTYDARRL KDDSVYNAAL GAAELGGLIE
DYRGSYIMTF AGYNAGRGSV RKWVERYGDP RDPKVDAVDW VELIPFSETR NYVQRIMENL
QVYRARFGGG NRLQIDADLR RGAAAVE
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