| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3029 |
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| Symbol | |
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| ID | 3910828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3452086 |
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| End bp | 3453441 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637884935 |
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| Product | agarase |
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| Protein accession | YP_486642 |
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| Protein GI | 86750146 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.933436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA TTCCGAGAAC CCGCTGGGGC GGCCTCGCCG AAGACAAGGC TGCGGCCACC
GGCTTTTTCC GCGTCGCGCA GATCGACGGC GTGTGGTGGT TCATCGATCC GGACGGCGGC
CGCTTCCTGT CGAAGGGCGT CACCGCGGTG AATTTCGACC ACGACAGTAT CAAAGGCACC
GAGCGTCACC CCTATCGCGA GGCGAGCCTG CACAAATACG GCAGCCGCAA CGCCTGGCGC
AGCGCCGTCG CCGATCGCCT GCACCGCTGG GGCTTCAACA CGATCGGGGC GTGGTCGGAG
CCGGAGGTGG CATCGGCCGG CTGCGCCCCG CTGGCCTCGG CCGCCGGCGT GGTCTATCTC
GCCACCGCCT ACAGTGACGG CCGCGGCTGG CCGCAATCCG ATCCGTTCGC TCCGGCCTTC
GAGACCTTCG CGCAGCAACG CGCCCGCGAG ATCTGCGCGC CGCGGCGTGA CGATCCGAGC
GTGCTCGGCT GGTTCATCGA CAACGAGTTG CAATGGGGCC CGGACTGGCG CGGCGAGAAC
GAACTGCTGC CGGTGATCCT GCGCGACAAC GCGGCGCCGC ATTCACGCCA GGTAGCGGTC
GACCTGCTGC GCCGCCGCTA CGCCAGCGTC GCAGAGTTCA ACACAGCGTG GCGATGCTCT
GCATCATCGT GGGACGCGCT GGCGACCGTG CCGATCGCGG CCCCGCCCTT CACCCGCAAT
TTCTTCACAC ATGATCACGC GCAGGAACGC GATCCGTTGC GCGGGCGTTA CTTCGCCGAT
TGCGATGCCT TCGCCGGGCT GCTCGCCGAG CGCTACATGG CGGTGAGCGC CGCGGCGATC
CGCGCGGCCG CGCCGCATCA TCTCGTGCTC GGCAGCCGCT TCGCCTACGC GCCGCAGCCG
CAGGTCATCG CTGCCGCCGG CCGGCATTGC GACGTCATCA GCATCAATTG CTACGACGCT
TTGCCCGACG CAGTGATCGA CGCCTATGCC GAATGCGGCC GGCCCTGCCT GATCGGCGAG
TTCTCGTTCC GCGGCGACGA CGCCGGGTTG CCGAACACGC AAGGCGCCGG GCCGCGCGTC
GAGACGCAGG CGGATCGCGC CGCAGGCTTT GCGCGCTATG TCGGTGCCGG CCTGCGCCAC
CCGAACCTGA TCGGCTATCA CTGGTTCCTG CACGCCGATC AGCCGGCGGA AGGCCGCTGG
GACGGCGAGA ATTCCAACTA CGGCGTCGTC ACCATCGACG ATGAGGTTTA TGTCGAACTG
ACCGAGGCGA TGACGGTGGT CAATGACGAC GCCGAATGGC TGCACGCCGG CGCAGCGCAG
GTCCGGCGAC ACATCGCAAC GCCGTCGGCG GCCTGA
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| Protein sequence | MTDIPRTRWG GLAEDKAAAT GFFRVAQIDG VWWFIDPDGG RFLSKGVTAV NFDHDSIKGT
ERHPYREASL HKYGSRNAWR SAVADRLHRW GFNTIGAWSE PEVASAGCAP LASAAGVVYL
ATAYSDGRGW PQSDPFAPAF ETFAQQRARE ICAPRRDDPS VLGWFIDNEL QWGPDWRGEN
ELLPVILRDN AAPHSRQVAV DLLRRRYASV AEFNTAWRCS ASSWDALATV PIAAPPFTRN
FFTHDHAQER DPLRGRYFAD CDAFAGLLAE RYMAVSAAAI RAAAPHHLVL GSRFAYAPQP
QVIAAAGRHC DVISINCYDA LPDAVIDAYA ECGRPCLIGE FSFRGDDAGL PNTQGAGPRV
ETQADRAAGF ARYVGAGLRH PNLIGYHWFL HADQPAEGRW DGENSNYGVV TIDDEVYVEL
TEAMTVVNDD AEWLHAGAAQ VRRHIATPSA A
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