Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3028 |
Symbol | |
ID | 3910827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3451041 |
End bp | 3451985 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637884934 |
Product | esterase/lipase/thioesterase |
Protein accession | YP_486641 |
Protein GI | 86750145 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0380453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCAA AACTCGATCC CGATGCCGCC GCCGTCTACA AGGCGTTCCA GGACGCGGGC CGCCCCGCCT ATGAAGATCT CACGGCCGAG GAAGCGCGCG CGTACTACGA CGCCGCCCGG CTCGTCAGCA ATCCCGACCC GCGCGAACTC GCCTCGATCC AGTCGATCGC GATCCCTGGA CCCGCAGGCG ACATCCCGGC CCGCGTCTAC ACGCCGAAGA CACTGCGTCA GGACAACGGT CTGGCGCCGG CGCTGGTGTT CTTTCACGGC GGCGGCTGGG TGATCGGCAA TCTCGACACC CATGACGTCG TCTGCCGCGC CATCGCCGAC GAAGGCCAAC TGATCGTCAT CTCGGTCGAC TACCGGCTCG CCCCCGAGCA CAAATTCCCG GCCGCCGTCG AGGACGCGAT CGCGGCGACC CAATGGGTCG CCGACAATGC GCGCAAGCTC GGCATCGATC CCGAACGCAT CAGCGTCGGC GGCGACAGCG CCGGCGGCAA TCTGTCGGCC GTGGTGACGA TCCACGCCCG CGACCATGGC GGGCCGATGC TCGCCGGCCA GGTGCTGATC TATCCGGCCA CCGACTTCGC GATGGACCAT CCGTCGCACA GCGAACCGGA GACCAGCGTG CTGCTGACGC ATTCCGTGAT CAGATGGTTT CGCGATCACT ATCTCGGCGG CGCACCGGTC GAACAGGACT GGCGCGCCTC CCCGGCCCGC GTCGAAACCC TGGCCGGGCT GCCGCCGGCC TTCGTCATCA CCGCCGGCGC CGACCCGCTG CGCGACGAAG GCGACGAATA CGCGCGTCGC CTCGCCGATG CCGGCGTGCC GGTGACGCAT CGGACTTATC CCGGCCAATT CCACGGCTTC TTCACCATGG GCAAGCTGCT GCCGAAGGCG AACGACGCGG TCGTCGAAAT CGGCGATTGG CTGAAGGCGC TGTAG
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Protein sequence | MPAKLDPDAA AVYKAFQDAG RPAYEDLTAE EARAYYDAAR LVSNPDPREL ASIQSIAIPG PAGDIPARVY TPKTLRQDNG LAPALVFFHG GGWVIGNLDT HDVVCRAIAD EGQLIVISVD YRLAPEHKFP AAVEDAIAAT QWVADNARKL GIDPERISVG GDSAGGNLSA VVTIHARDHG GPMLAGQVLI YPATDFAMDH PSHSEPETSV LLTHSVIRWF RDHYLGGAPV EQDWRASPAR VETLAGLPPA FVITAGADPL RDEGDEYARR LADAGVPVTH RTYPGQFHGF FTMGKLLPKA NDAVVEIGDW LKAL
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