Gene RPB_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3028 
Symbol 
ID3910827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3451041 
End bp3451985 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content68% 
IMG OID637884934 
Productesterase/lipase/thioesterase 
Protein accessionYP_486641 
Protein GI86750145 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0380453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAA AACTCGATCC CGATGCCGCC GCCGTCTACA AGGCGTTCCA GGACGCGGGC 
CGCCCCGCCT ATGAAGATCT CACGGCCGAG GAAGCGCGCG CGTACTACGA CGCCGCCCGG
CTCGTCAGCA ATCCCGACCC GCGCGAACTC GCCTCGATCC AGTCGATCGC GATCCCTGGA
CCCGCAGGCG ACATCCCGGC CCGCGTCTAC ACGCCGAAGA CACTGCGTCA GGACAACGGT
CTGGCGCCGG CGCTGGTGTT CTTTCACGGC GGCGGCTGGG TGATCGGCAA TCTCGACACC
CATGACGTCG TCTGCCGCGC CATCGCCGAC GAAGGCCAAC TGATCGTCAT CTCGGTCGAC
TACCGGCTCG CCCCCGAGCA CAAATTCCCG GCCGCCGTCG AGGACGCGAT CGCGGCGACC
CAATGGGTCG CCGACAATGC GCGCAAGCTC GGCATCGATC CCGAACGCAT CAGCGTCGGC
GGCGACAGCG CCGGCGGCAA TCTGTCGGCC GTGGTGACGA TCCACGCCCG CGACCATGGC
GGGCCGATGC TCGCCGGCCA GGTGCTGATC TATCCGGCCA CCGACTTCGC GATGGACCAT
CCGTCGCACA GCGAACCGGA GACCAGCGTG CTGCTGACGC ATTCCGTGAT CAGATGGTTT
CGCGATCACT ATCTCGGCGG CGCACCGGTC GAACAGGACT GGCGCGCCTC CCCGGCCCGC
GTCGAAACCC TGGCCGGGCT GCCGCCGGCC TTCGTCATCA CCGCCGGCGC CGACCCGCTG
CGCGACGAAG GCGACGAATA CGCGCGTCGC CTCGCCGATG CCGGCGTGCC GGTGACGCAT
CGGACTTATC CCGGCCAATT CCACGGCTTC TTCACCATGG GCAAGCTGCT GCCGAAGGCG
AACGACGCGG TCGTCGAAAT CGGCGATTGG CTGAAGGCGC TGTAG
 
Protein sequence
MPAKLDPDAA AVYKAFQDAG RPAYEDLTAE EARAYYDAAR LVSNPDPREL ASIQSIAIPG 
PAGDIPARVY TPKTLRQDNG LAPALVFFHG GGWVIGNLDT HDVVCRAIAD EGQLIVISVD
YRLAPEHKFP AAVEDAIAAT QWVADNARKL GIDPERISVG GDSAGGNLSA VVTIHARDHG
GPMLAGQVLI YPATDFAMDH PSHSEPETSV LLTHSVIRWF RDHYLGGAPV EQDWRASPAR
VETLAGLPPA FVITAGADPL RDEGDEYARR LADAGVPVTH RTYPGQFHGF FTMGKLLPKA
NDAVVEIGDW LKAL