Gene RPB_3026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3026 
Symbol 
ID3910825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3449079 
End bp3450059 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content71% 
IMG OID637884932 
Producthypothetical protein 
Protein accessionYP_486639 
Protein GI86750143 
COG category[S] Function unknown 
COG ID[COG4765] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.906877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGG CCGAAGCTGT AGAATGTCGC AAGCCTGATT CGTCATTGAA GCCGCGCGGA 
ATGTCCCGAA GCCTCTGTTT TGTCGGTCTT GCGGCGCTGA TCGCCGCCCC GTTGATCACG
CTCGCGCCGC CGGCGCAGGC GCAGATCGGC AATATTTTCT CCGACCCGGC GCCGCGTCCG
CCCGGTGCGA TCCCGCGTGG CGCGCCGCAG ATGGACGACG AGGAAGAGGT TCCCGACCTG
CCGCCGCAAG GCCGCGTGCT GCCGGCGCCG ACCCGGCCGC CGCAGGGCTC GGCACTTCCA
GGCCCGGTGC AGTCTCAGCC GCTGCCGCCG CCGCCCGGCA CCACGATCAT TCCGCAGACC
CCGCCGGCCA CGGCCAACGT GCCGCCCGGC CAGCCCGACA GCGGCGTCGC CAACGCGCCG
CCGGGTGCCA ATCCGCTGCC GGGCCTGCCG CCCGGTCAGC GCCAGCCGCG TGGCGCGCCG
CCGACGCCGG CGACGCTGCA GCCCGGCGAC GAGATCGTCA CCGAGCCGCC GGCGCAGAAG
ATCGTCAACA AGAAGGCGAG CTTCACCGGC CTCGACAAGA TCACCGGTCG CACCATCAAT
TTCGACGCCG ACATCGGCGA GACGGTGCAG TTCGGCGCGT TGCGCGTGAA GACCGACGCC
TGCTACACGC GGCCCTCGAC CGAGGCTGCC AACACCGACG CCTTCGTCGA GGTCGACGAG
ATCACGCTGC AGGGCGAGGT GAAGCGGATC TTCTCCGGCT GGATGTTCGC CGCCAGTCCC
GGCCTGCACG CGGTCGAGCA TCCGATCTAC GATATCTGGC TGACCGATTG TAAGAACCCC
GAGACGCCGG TCGTCAGCGC CCAACCCGAT GCGCCGAAGC CCGCCGCTGC ACAACCGCAG
CAGCAGCAGC GCCGCCGCCA GCCGCCACCG CGCCAGACCC AGCAGGCGCC GCCGCCGCCT
TTGCCGGCAT TCCGGCAGTA A
 
Protein sequence
MQAAEAVECR KPDSSLKPRG MSRSLCFVGL AALIAAPLIT LAPPAQAQIG NIFSDPAPRP 
PGAIPRGAPQ MDDEEEVPDL PPQGRVLPAP TRPPQGSALP GPVQSQPLPP PPGTTIIPQT
PPATANVPPG QPDSGVANAP PGANPLPGLP PGQRQPRGAP PTPATLQPGD EIVTEPPAQK
IVNKKASFTG LDKITGRTIN FDADIGETVQ FGALRVKTDA CYTRPSTEAA NTDAFVEVDE
ITLQGEVKRI FSGWMFAASP GLHAVEHPIY DIWLTDCKNP ETPVVSAQPD APKPAAAQPQ
QQQRRRQPPP RQTQQAPPPP LPAFRQ