Gene RPB_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3022 
Symbol 
ID3910821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3445309 
End bp3445752 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID637884928 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_486635 
Protein GI86750139 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0614776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACC CAGTCACCAT CATCATGATC GAGGACGACG AGGGCCACGC GCGCCTGATC 
GAGCGCAATA TTCGCCGGTC CGGCGTCAAC AACGAGATCG TTCCGTTCAC GTCCGGTACA
GCCGCGCTGA ACTACCTGTT CGGGGCCGAC GGCTCGGGCA TCGAGCATCA GAATCGCGCG
CTCCTGGTGC TGCTCGATCT CAACCTCCCC GACACCAGCG GCATCGATAT TCTCCGGCGC
GTCAAGGAAA ACGATCATCT CAAATGCACG CCCGTCGTGG TGTTGACCAC CACCGACGAC
GCGCAGGAAA TCAAGCGTTG CTACGAGCTC GGCTGCAACG TCTACATCAC CAAGCCGGTG
AACTACGAGA GCTTCGCCAA CGCGATCCGT CAGCTCGGCC TGTTCTTTTC CGTGATCCAG
GTCCCTCAAA CCGAGGCTCC ATGA
 
Protein sequence
MSNPVTIIMI EDDEGHARLI ERNIRRSGVN NEIVPFTSGT AALNYLFGAD GSGIEHQNRA 
LLVLLDLNLP DTSGIDILRR VKENDHLKCT PVVVLTTTDD AQEIKRCYEL GCNVYITKPV
NYESFANAIR QLGLFFSVIQ VPQTEAP