Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3015 |
Symbol | |
ID | 3910814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3438645 |
End bp | 3439274 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637884921 |
Product | peroxidase |
Protein accession | YP_486628 |
Protein GI | 86750132 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.183076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.525721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTCC ACATCGGCGA CACCGCGCCC GATTTCACCG CCGACACCAC CCAGGGGCCG ATTTCGTTTC ACGACTTCAT CGGCGATTCC TGGGTCTTCT TCTTCAGCCA TCCCGCCGAC TTCACGCCGG TCTGCACCAC CGAGATGGGC AGAACCTCGA AGCTCGCGCA ACAGTTCGCC GCCCGCAACG TCAAGCCGAT CGGGCTGTCG ACCGACACCG TCGACGAGCA CCTCAAATGG ATCGCGGACG TCAACGACAC CCAGCAGACC GATCTGCAAT TCCCGATCGT CGCCGACAAG GAGCTGAAGG TCGCCAAGCT CTACGACATG ATCCACCCGA ACCAGAGCAA CACCGCGGCG GTGCGTTCGG TGTTCATCAT CGATCCGAAC AAGAAAGTCC GCCTGACCAT GACCTACCCG ATGAATGTCG GGCGCAACTT CGACGAGATC CTGCGCGTGA TCGATGCGCT GCAGATGGCC GACAAGTACA CCGTCGCCGC GCCGGCCGAC TGGCGCCCAG GCGACAAGGT GATCATCCCG CTGTCGCTGC AGGGCGAAGA CGCCGTGAAG GCATTCCCCC AGGGCTGGGA TGCGCCGCGT CCCTATCTGC GCCTGACCAC CGTCAAGTAG
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Protein sequence | MSLHIGDTAP DFTADTTQGP ISFHDFIGDS WVFFFSHPAD FTPVCTTEMG RTSKLAQQFA ARNVKPIGLS TDTVDEHLKW IADVNDTQQT DLQFPIVADK ELKVAKLYDM IHPNQSNTAA VRSVFIIDPN KKVRLTMTYP MNVGRNFDEI LRVIDALQMA DKYTVAAPAD WRPGDKVIIP LSLQGEDAVK AFPQGWDAPR PYLRLTTVK
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