Gene RPB_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3015 
Symbol 
ID3910814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3438645 
End bp3439274 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content63% 
IMG OID637884921 
Productperoxidase 
Protein accessionYP_486628 
Protein GI86750132 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.183076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.525721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCC ACATCGGCGA CACCGCGCCC GATTTCACCG CCGACACCAC CCAGGGGCCG 
ATTTCGTTTC ACGACTTCAT CGGCGATTCC TGGGTCTTCT TCTTCAGCCA TCCCGCCGAC
TTCACGCCGG TCTGCACCAC CGAGATGGGC AGAACCTCGA AGCTCGCGCA ACAGTTCGCC
GCCCGCAACG TCAAGCCGAT CGGGCTGTCG ACCGACACCG TCGACGAGCA CCTCAAATGG
ATCGCGGACG TCAACGACAC CCAGCAGACC GATCTGCAAT TCCCGATCGT CGCCGACAAG
GAGCTGAAGG TCGCCAAGCT CTACGACATG ATCCACCCGA ACCAGAGCAA CACCGCGGCG
GTGCGTTCGG TGTTCATCAT CGATCCGAAC AAGAAAGTCC GCCTGACCAT GACCTACCCG
ATGAATGTCG GGCGCAACTT CGACGAGATC CTGCGCGTGA TCGATGCGCT GCAGATGGCC
GACAAGTACA CCGTCGCCGC GCCGGCCGAC TGGCGCCCAG GCGACAAGGT GATCATCCCG
CTGTCGCTGC AGGGCGAAGA CGCCGTGAAG GCATTCCCCC AGGGCTGGGA TGCGCCGCGT
CCCTATCTGC GCCTGACCAC CGTCAAGTAG
 
Protein sequence
MSLHIGDTAP DFTADTTQGP ISFHDFIGDS WVFFFSHPAD FTPVCTTEMG RTSKLAQQFA 
ARNVKPIGLS TDTVDEHLKW IADVNDTQQT DLQFPIVADK ELKVAKLYDM IHPNQSNTAA
VRSVFIIDPN KKVRLTMTYP MNVGRNFDEI LRVIDALQMA DKYTVAAPAD WRPGDKVIIP
LSLQGEDAVK AFPQGWDAPR PYLRLTTVK