| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3008 |
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| Symbol | |
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| ID | 3910807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3427721 |
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| End bp | 3429031 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884914 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_486621 |
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| Protein GI | 86750125 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.225785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGGGGC GCGCAAATCA TTTTGTTTTG TTCAGCGCCG TCTTCGCGTG CGCTGCAGCA
TGGATGTGCG CGTCGCCGAC CCAGGGGTGG GCCGTGGAAG CCCTGCCTGC CCCCTCGACC
CCAACCCAAA GCACTGCAGC GCCGGTCACA AACGGCTTTC CGATCGCGTC CGATGCCCGT
CTGGCGGGTG ACGAGAAGCA GACCCGGTTC ATCGTCGATT TCGACACCAA GGTTCCGATC
CGCGCGTTCG CGCTGGCGGA TCCGTATCGC ATCGTCATCG ATCTGCCGCA GATCAATTTC
CGCCTGCCGT CGGCCGCCAA TGGTGCAAGT CGTGGCCTGA TCAAGGCTTT TCGGTACGGC
CTGGTGATGC CCGGCGGCTC GCGGATCGTG CTCGAACTGG CGGGGCCGGC GAAGATCGCC
AAGGCCGATA TGCTCGACGC AGCCAATGGG CAGCCGGCGC GGCTGGTGAT CGAACTCGAT
TCGGTTGACC GCACGGCCTT CGTCGCGGCG CTTAGTGCCG AGAAGGCGCC CGAACTGCGA
CCTTCGGTCA GTATGGCGGA TGCGACCTCG TCAGTGCCAG CTGCCGATGC GGCGAAGGAC
GATCCGCGGC CGGTCGTCGT GCTCGATCCG GGACATGGCG GGATCGACAA CGGCACCCAA
TCCGCCAGTG GCATCGCCGA GAAGACGCTG GTGCTGGATT TCGCGCTGGC GTTGCGCGAC
CAGATGGAAA AGGGCGGCAA GTACCGCGTG GTGCTGACCC GCGCCGACGA CACCTTCATT
CCGCTCAACG ACCGGGTGAA GATCGCGCGC GCGCAGTCCG CCGCGCTGTT CGTGTCGATT
CATGCCGACG CGCTGCCGCG CGGCGAGGGC GATGCCCAGG GCGCCACCAT CTACACGCTG
TCCGACAGGG CCTCCGATGC CGAGGCGCAG CGGCTGGCGG ATGCCGAAAA CAGGGCCGAC
GCGATCGGCG GGGTCGATCT GACCGAAGAG CCGACCGAGG TCGCCGATAT CCTGATCGAC
CTCGCGCAGC GCGAGACCAA GACGTTCTCG AACAGCTTCG CCCGGACCTT GATGCGGGAA
ATGAAGGGCG CGACCCGGCT GCACAAGAAT CCTCTCAAAT CCGCCGGCTT CCGGGTCCTG
AAGGCGCCCG ACGTGCCGTC GGTGCTGATC GAACTCGGCT ATGTCTCCAA CAAAGGCGAC
CTCAAGCAGC TGATTTCCGA ACAGTGGCGC ACCAAGACCG TCGGCGCGGT CTCCCAGGCG
ATCGATTCGT TTTTCGCCAG GCGGTTGGTC TCGGCCGGAA AGCCGAACTG A
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| Protein sequence | MQGRANHFVL FSAVFACAAA WMCASPTQGW AVEALPAPST PTQSTAAPVT NGFPIASDAR
LAGDEKQTRF IVDFDTKVPI RAFALADPYR IVIDLPQINF RLPSAANGAS RGLIKAFRYG
LVMPGGSRIV LELAGPAKIA KADMLDAANG QPARLVIELD SVDRTAFVAA LSAEKAPELR
PSVSMADATS SVPAADAAKD DPRPVVVLDP GHGGIDNGTQ SASGIAEKTL VLDFALALRD
QMEKGGKYRV VLTRADDTFI PLNDRVKIAR AQSAALFVSI HADALPRGEG DAQGATIYTL
SDRASDAEAQ RLADAENRAD AIGGVDLTEE PTEVADILID LAQRETKTFS NSFARTLMRE
MKGATRLHKN PLKSAGFRVL KAPDVPSVLI ELGYVSNKGD LKQLISEQWR TKTVGAVSQA
IDSFFARRLV SAGKPN
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