Gene RPB_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3006 
Symbol 
ID3910805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3423797 
End bp3424765 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID637884912 
Productpeptide chain release factor 2 
Protein accessionYP_486619 
Protein GI86750123 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.743846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.215717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAGC GCACCTCGCT GGAGGATTCG CTCACCGGCA TCGGCAAGGT CGAGCGTGAG 
CTCAGCGACA ATATCGAGAT GATCGAACTC GGCGAGGCCG AGGGCGACGA GGGCGTCGTC
CGCGAGGCCG AGGCTGCGCT CAAGGCGCTG AAGAAGGAAG TCGCGCGGCG CGAACTCGAA
GCGCTGCTGT CCGGCGAGGC CGATCGCTTC GACACTTATC TCGAAGTCCA CGCCGGCGCC
GGCGGCACCG AGAGCCAGGA CTGGGCCTCG ATGCTGCTGC GGATGTACAC GCGCTGGGCC
GAGAAGCACG GCTTCAAGGT CGAGTATCTC GAAGAATCCG AGGGCGAAGA GGCGGGGATC
AAATCGGCGA CGATCCAGAT CTCGGGTCAC AACGCCTATG GCTGGCTCAA GACCGAGGCC
GGCGTGCACC GGCTGGTGCG CATCTCGCCG TTCGATTCCA ACGCGCGGCG GCACACCTCG
TTCTCGTCGG TGCAGATTTT CCCGGTGATC GACAATTCGA TCAAGATCGA CATCGCCGAG
TCCGACGTCC GGGTCGACAC GATGCGCTCC GGCGGCGCCG GCGGCCAGCA CGTCAACAAG
ACCGAATCCG CGGTGCGCCT GACGCACGTC CCGACCGGCG TCGCGGTGGT CTGTCAGGCC
GGCCGCTCGC AGCACAAGAA CCGCGCCCAG GCGTGGGACA TGCTGCGCGC GCGTCTTTAC
GAAATCGAGC TGAAGAAGCG CGAAGAGCAG GCTGCCGCCG ATCAGGCCGC CAAGACCGAA
ATCGGCTGGG GCCACCAGAT CCGCTCCTAC GTGCTGCAGC CCTACCAGAT GGTCAAGGAC
CTGCGCACCG GCGTGCAGAC CTCCGACACC GCCGGCGTGC TCGACGGCGA CCTCGACGAA
TTCATGGCCG CGACCCTGGC GCAGCGCGCG TTCGGCACGG GGCCGGGCAG TGTCGAGGAC
GTGGACTAA
 
Protein sequence
MQERTSLEDS LTGIGKVERE LSDNIEMIEL GEAEGDEGVV REAEAALKAL KKEVARRELE 
ALLSGEADRF DTYLEVHAGA GGTESQDWAS MLLRMYTRWA EKHGFKVEYL EESEGEEAGI
KSATIQISGH NAYGWLKTEA GVHRLVRISP FDSNARRHTS FSSVQIFPVI DNSIKIDIAE
SDVRVDTMRS GGAGGQHVNK TESAVRLTHV PTGVAVVCQA GRSQHKNRAQ AWDMLRARLY
EIELKKREEQ AAADQAAKTE IGWGHQIRSY VLQPYQMVKD LRTGVQTSDT AGVLDGDLDE
FMAATLAQRA FGTGPGSVED VD