Gene RPB_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3004 
Symbol 
ID3910803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3421877 
End bp3422803 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content63% 
IMG OID637884910 
Producthypothetical protein 
Protein accessionYP_486617 
Protein GI86750121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.119499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCAG GAATTCATCC TATTCATCCA CGGGATTGGA CGCTGCTGAT CGCGCTGTCG 
ATCCTGTGGG GCGCATCGTT CTTTTTCGTG GGCGTGGCCC TGAAAGAGCT GCCGCCTTTC
ACCATCGTTT TTCTTCGGGC CGCGATCGCG GCGCTGGTCC TGTTCCTGAT CGTTTGGGTC
CGCAGGATTC CGATGCCGCG CGGTGTCGTC GGCTGGTGGC CCTTTGTCGG AATGGCCTGT
CTCAACTTCG TCGTTCCGTT CTCCTGTCTC GTGACCGGTC AGACATTCAT CTCGACCGGA
CTGGCGTCCG TGCTCAATGC GACGACACCT TTGTTCACCG TTGTCGTCAT GGCGGCGGCC
GGAGAGGAAC GGCTGACGGC ACGGCGTGTC ATCGGAGTCG TGGCTGGCGT GGTCGGAGTC
GCCGTCCTCC GTGGCCTGGA CCTGCGGGAA GCCGAGACGG GGATCGGCGT GGCACTGTGT
CTTTGCGCGG CGCTCTCGTA TGGGCTGTCG GCGCTACTGG CCCGAAGGCT TCTGATCGGT
TTCGCGCCGC TGACCACGGC GACTTCGCAG ATGCTGGCGG CGGCCATCAT CACGGGCGTC
GTCGCGGCGT GTGTCGATCA GCCATTGAGC CTGCCGGTTC CGAGCTTGTC GGTCATTCTG
GCTGTGGTGG CGCTCGGCAC GCTCTCGACC GCGCTCGGCT ACGTGCTGTT CTTCCGGATT
GTCGCGCGGT CCGGGTCGAC CAACGTCATG CTGGTGACGC TCCTGATCCC AGTCACTGCC
ATTCTGCTCG GCACCGTCGT GCTGCACGAA GATATAGGCC TTCGTGAACT GATGGGCGGC
AGCATGATTG CCAGCGCGCT TCTTATCATC GACGGCCGAG CCTTGGCATG GATCGAAGCG
CGCCGGTGGC GGACCGAGCG ATCCTAA
 
Protein sequence
MASGIHPIHP RDWTLLIALS ILWGASFFFV GVALKELPPF TIVFLRAAIA ALVLFLIVWV 
RRIPMPRGVV GWWPFVGMAC LNFVVPFSCL VTGQTFISTG LASVLNATTP LFTVVVMAAA
GEERLTARRV IGVVAGVVGV AVLRGLDLRE AETGIGVALC LCAALSYGLS ALLARRLLIG
FAPLTTATSQ MLAAAIITGV VAACVDQPLS LPVPSLSVIL AVVALGTLST ALGYVLFFRI
VARSGSTNVM LVTLLIPVTA ILLGTVVLHE DIGLRELMGG SMIASALLII DGRALAWIEA
RRWRTERS