| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3003 |
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| Symbol | |
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| ID | 3910802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3420507 |
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| End bp | 3421880 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637884909 |
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| Product | peptidase M23B |
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| Protein accession | YP_486616 |
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| Protein GI | 86750120 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.070332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTACC GTTCTGGCCA CCATTCCGAC CATCCGCAGC ACCACGCACC GCATCACGGC
CGCCAAGCGC CGTACCGGGC TCGCCGCCCG CAGCCGGGGC CTCAGCCTCA GATCGCAGCG
GAGGCCTCGA GCTACACCTT CGCTCACGCC GGCCGGCAGG TGCGGATCGG GCCCGTGCTG
TTCTGGATCG TCGTCGGCAC CATCGTCGCG CTCGGCTGCT GGTCTGCCGC CACCGCCACC
TATTTCGCGT TCCGCGACGA CGTCCTGACC CGGCTGATCG CCCGCCAGGC CGAGATGCAA
TACGCCTACG AGGACCGCAT CGCCGAGCTG CGCGCCAAGG TCGACCGCAC CACCAGCCGG
CAGTTACTCG ATCAGGAGCA GTTCGACCAG AAGCTCGACC AGGTGATGCG CCGCCAGACC
ATGCTGGAAT CGCGCGCCAG CGCGATGAGC ACCCTGCCCG ACGTCGCCGT CACCGGCAGC
ATCAAGAGTT CACGGACGCC CGCACCGGAC AGCACGCCCG CCGGCCCGCT GAAGCCGTCG
CCGATCAACG ACACGGTGAT CTTCGTCGCT CCGCCGGATC GTGAAGCGCG GCTGGAATCA
CGCTCCCCCG CTGCAGCGCC GTCGCTGCCG ACGACGCAAT ACGCCAAGGC CCAGGGCCTC
GACACCGCGC TGACGAAACT CGAGCAGTCG CTCGACCAGG TCGAGAAGCG GCAGATCGCA
ACGCTCGGCT CGGTCGAGGA AAGTTTCGAG TCCCGCGCGC GCCGGATGCG CGGCGTGCTG
GCCGATCTCG GCCTCGCCGC CCGCGGTCTG GAAGCCGCGG CGCCCCGGGC CGGCGTCGGC
GGTCCGTTCG TGCCGCTGAA AGCGCCGTCT GCCAATGCCA GCGCGTTCGA CCGCCAGCTC
TATCGGATCA ATCTCAGCCG ATCGCAGCTC GACCGCCTCA ACCGCGCGCT GACGCTGGTG
CCGTATCGCA AGCCGGTGGT CGGCGAGGTC GAATTCTCCT CGGGCTTCGG CGTCCGCACC
GATCCGTTTC TCGGCCGTCC GGCCATGCAC ACCGGCCTCG ATTTCCGCGG CAACAGCGGC
GACCCGGTCC GCGCCACGGC GATCGGCAAG GTGGTCAACG CGGGCTGGCA GGGCGGCTAC
GGCCAGATGG TCGAGATCGA CCACGGCAAC GGCCTGTCGA CGCGCTACGG CCATCTGTCG
AAGATCATCG CCAAGGTCGG CCAGAGCGTC CAGATCGGCC AGATGATCGG CGAGATCGGC
TCCACCGGCC GCTCCACCGG CCCGCATCTG CACTACGAAA CGCGCATCGA CGGTGAAGCG
GTCGACCCGC AGAAGTTTCT GCGCGCGGGG GTGCGGCTGG CGGGGGCGGG TTAG
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| Protein sequence | MPYRSGHHSD HPQHHAPHHG RQAPYRARRP QPGPQPQIAA EASSYTFAHA GRQVRIGPVL
FWIVVGTIVA LGCWSAATAT YFAFRDDVLT RLIARQAEMQ YAYEDRIAEL RAKVDRTTSR
QLLDQEQFDQ KLDQVMRRQT MLESRASAMS TLPDVAVTGS IKSSRTPAPD STPAGPLKPS
PINDTVIFVA PPDREARLES RSPAAAPSLP TTQYAKAQGL DTALTKLEQS LDQVEKRQIA
TLGSVEESFE SRARRMRGVL ADLGLAARGL EAAAPRAGVG GPFVPLKAPS ANASAFDRQL
YRINLSRSQL DRLNRALTLV PYRKPVVGEV EFSSGFGVRT DPFLGRPAMH TGLDFRGNSG
DPVRATAIGK VVNAGWQGGY GQMVEIDHGN GLSTRYGHLS KIIAKVGQSV QIGQMIGEIG
STGRSTGPHL HYETRIDGEA VDPQKFLRAG VRLAGAG
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