| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2998 |
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| Symbol | |
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| ID | 3910797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3412469 |
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| End bp | 3413725 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884904 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_486611 |
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| Protein GI | 86750115 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.243953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0659973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAT TTAAGTCTGA TTTTATGAAC GTGCTCCAGC AGCGGGGCTT CGTTCATCAG
ATGTCCGACC CGGAATCGCT GGACGCGCTG GCAGCGCGCG GCGAGGTCGT CGCCTATGTC
GGCTACGACT GCACCGCGCC GTCGCTGCAT GTCGGTCATC TCTTGTCGAT CATGATGCTG
CACTGGCTGC AGGCCACCGG CAACAAGCCG ATCGCGCTGA TGGGCGGCGG CACCACGCGC
GTCGGCGATC CGTCCGGCCG CGACGAGACC CGCAAGATCC TCACCTACGA CCAGATCGAC
GCCAACAAGG AGTCGATCAA GGGCACGTTC GCGAAGTTCA TCAAGTTCGG CGACGGCGCC
AGCGACGCGC TGATGGCCGA CAACGCCGAA TGGCTGACCA AGCTGAACTA CATCGAGATG
CTGCGCGACA TCGGCCGCCA CTTCTCGATC AACCGCATGC TGACGATGGA TTCGGTGCGG
ATGCGGCTCG AGCGCGAGCA GGAGCTGTCG TTCATCGAGT TCAATTACAT GATCCTGCAG
TCCTACGACT TCGTCGAGCT GGCGCGGCGC TACAATTGCA ACCTTCAGAT GGGCGGCTCC
GACCAGTGGG GCAACATCGT CACCGGCGTC GACCTCGGCC GCCGCATGGG GACGCACCAG
CTTCACGCGC TGACTTGCCC GCTGCTGACG ACATCGTCCG GCGCCAAGAT GGGCAAGACC
GCCGCCGGCG CGGTCTGGCT CAACGGCGAC ATGCTGGCGC CCTACGACTA CTGGCAGTAC
TGGCGCAACA CCGAGGACGC CGACGTCGGC CGCTTCCTCA AACTGTTCAC GCTGCTGCCG
ATCGACGAGG TCGAACGGCT GGCGAAGCTG CAGGGAGCCG AGATCAACGA GGCGAAGAAG
GTGCTCGCCA CCGAGGCGAC CGCACTGATG CACGGCCGTG AGACGGCGGA GAAGGCGGAG
GCGACGGCGC GGACGACGTT CGAACAAGGC GGCACCGCGC AGGACCTGCC GAGCATCGAC
GTCACCCGCG CCGAGCTCGA CGCCGGGATC GGCGTGCTCG CGGCGTTCGC CGAGAAGGCC
GGCCTCGTCG CCTCCAACGG CGAGGCGCGG CGGCAGATCA AGGCCGGCGG CCTGCGGGTC
AACGACGTCC TCGTGACCGA CGAGAAGATG ACGCTGACCC CGGCAGATCT CACCCCTGAG
GGCGTGATCA AGCTGTCGAT GGGCAAGAAG AAGCACGTCC TGCTCAGGCT CGCATAG
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| Protein sequence | MTAFKSDFMN VLQQRGFVHQ MSDPESLDAL AARGEVVAYV GYDCTAPSLH VGHLLSIMML
HWLQATGNKP IALMGGGTTR VGDPSGRDET RKILTYDQID ANKESIKGTF AKFIKFGDGA
SDALMADNAE WLTKLNYIEM LRDIGRHFSI NRMLTMDSVR MRLEREQELS FIEFNYMILQ
SYDFVELARR YNCNLQMGGS DQWGNIVTGV DLGRRMGTHQ LHALTCPLLT TSSGAKMGKT
AAGAVWLNGD MLAPYDYWQY WRNTEDADVG RFLKLFTLLP IDEVERLAKL QGAEINEAKK
VLATEATALM HGRETAEKAE ATARTTFEQG GTAQDLPSID VTRAELDAGI GVLAAFAEKA
GLVASNGEAR RQIKAGGLRV NDVLVTDEKM TLTPADLTPE GVIKLSMGKK KHVLLRLA
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